Difference between revisions of "TRNA-URACIL-5--METHYLTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-12710 == * direction: ** left-to-right * common-name: ** 3-oxoacyl coa thiolase ** acetyl-coa c-acyltransferase * ec-number: ** [http://e...")
(Created page with "Category:reaction == Reaction RXN-602 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11.19 ec-1.14.11.19] * synonymous: ** leucoanthocy...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12710 ==
+
== Reaction RXN-602 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 3-oxoacyl coa thiolase
 
−
** acetyl-coa c-acyltransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/1.14.11.19 ec-1.14.11.19]
 +
* synonymous:
 +
** leucoanthocyanidin dioxygenase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CO-A]][c] '''+''' 1 [[CPD-13699]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-13700]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-590]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-19726]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16470]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** Category: [[annotation]]
+
* Gene: [[SJ14675]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
** Category: [[orthology]]
−
* Gene: [[SJ21817]]
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
** Category: [[annotation]]
+
* Gene: [[SJ07557]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
** Category: [[orthology]]
−
* Gene: [[SJ14898]]
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
* Gene: [[SJ14670]]
−
* Gene: [[SJ21818]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* Gene: [[SJ14677]]
−
* Gene: [[SJ09371]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* Gene: [[SJ14672]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08018]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6945]], cholesterol degradation to androstenedione I (cholesterol oxidase):
 
−
** '''5''' reactions found over '''17''' reactions in the full pathway
 
−
* [[PWY-6946]], cholesterol degradation to androstenedione II (cholesterol dehydrogenase):
 
−
** '''6''' reactions found over '''22''' reactions in the full pathway
 
−
* [[PWY-6948]], sitosterol degradation to androstenedione:
 
−
** '''2''' reactions found over '''18''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05036 R05036]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-oxoacyl coa thiolase|acetyl-coa c-acyltransferase}}
+
{{#set: ec-number=ec-1.14.11.19}}
−
{{#set: ec-number=ec-2.3.1.16}}
+
{{#set: synonymous=leucoanthocyanidin dioxygenase}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=6}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:33, 5 January 2021

Reaction RXN-602

  • direction:
    • left-to-right
  • ec-number:
  • synonymous:
    • leucoanthocyanidin dioxygenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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