Difference between revisions of "TRNA-uridine55"

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(Created page with "Category:gene == Gene SJ20716 == * transcription-direction: ** positive * right-end-position: ** 95807 * left-end-position: ** 85506 * centisome-position: ** 41.855003...")
(Created page with "Category:metabolite == Metabolite CPD1F-137 == * common-name: ** gibberellin a4 * smiles: ** c=c1(c3(cc4(c1)(c([ch]5(c2(c(=o)oc(ccc(o)2)([ch](cc3)4)5)(c)))c([o-])=o))) * i...")
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ20716 ==
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== Metabolite CPD1F-137 ==
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* transcription-direction:
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* common-name:
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** positive
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** gibberellin a4
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* right-end-position:
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* smiles:
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** 95807
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** c=c1(c3(cc4(c1)(c([ch]5(c2(c(=o)oc(ccc(o)2)([ch](cc3)4)5)(c)))c([o-])=o)))
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* left-end-position:
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* inchi-key:
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** 85506
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** rsqsqjnrhicnnh-ukjriftcsa-m
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* centisome-position:
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* molecular-weight:
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** 41.855003   
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** 331.388
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-6550]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[GLYOXYLATE-OXIDASE-RXN]]
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* [[RXN1F-165]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=gibberellin a4}}
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* [[HDAO10x]]
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{{#set: inchi-key=inchikey=rsqsqjnrhicnnh-ukjriftcsa-m}}
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** Category: [[orthology]]
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{{#set: molecular-weight=331.388}}
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-969]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[S-2-HYDROXY-ACID-OXIDASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-181]]
 
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** '''5''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=95807}}
 
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{{#set: left-end-position=85506}}
 
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{{#set: centisome-position=41.855003    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=4}}
 
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{{#set: nb pathway associated=1}}
 

Revision as of 20:33, 18 December 2020

Metabolite CPD1F-137

  • common-name:
    • gibberellin a4
  • smiles:
    • c=c1(c3(cc4(c1)(c([ch]5(c2(c(=o)oc(ccc(o)2)([ch](cc3)4)5)(c)))c([o-])=o)))
  • inchi-key:
    • rsqsqjnrhicnnh-ukjriftcsa-m
  • molecular-weight:
    • 331.388

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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