Difference between revisions of "TRNA-with-5-taurinomethyl-2-thiouridine"

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(Created page with "Category:gene == Gene SJ19104 == * transcription-direction: ** positive * right-end-position: ** 426131 * left-end-position: ** 402172 * centisome-position: ** 35.252983...")
(Created page with "Category:gene == Gene SJ01092 == * transcription-direction: ** negative * right-end-position: ** 161783 * left-end-position: ** 156847 * centisome-position: ** 14.156517...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19104 ==
+
== Gene SJ01092 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 426131
+
** 161783
 
* left-end-position:
 
* left-end-position:
−
** 402172
+
** 156847
 
* centisome-position:
 
* centisome-position:
−
** 35.252983    
+
** 14.156517    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[3.1.1.64-RXN]]
+
* [[1.1.1.145-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CARBOXYLESTERASE-RXN]]
+
* [[RXN-12693]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
+
* [[RXN-12747]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10711]]
+
* [[RXN-12789]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10767]]
+
* [[RXN66-342]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12252]]
+
* [[RXN66-350]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12575]]
+
* [[RXN66-353]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-9733]]
+
* [[UDP-GLUCURONATE-4-EPIMERASE-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXNQT-4366]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6303]]
+
* [[PWY-6946]]
 +
** '''6''' reactions found over '''22''' reactions in the full pathway
 +
* [[PWY-6944]]
 +
** '''2''' reactions found over '''25''' reactions in the full pathway
 +
* [[PWY-6948]]
 +
** '''2''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY66-378]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7299]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6857]]
+
* [[PWY-4861]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-6041]]
+
* [[PWY-6415]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=426131}}
+
{{#set: right-end-position=161783}}
−
{{#set: left-end-position=402172}}
+
{{#set: left-end-position=156847}}
−
{{#set: centisome-position=35.252983   }}
+
{{#set: centisome-position=14.156517   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=7}}

Revision as of 09:28, 27 August 2019

Gene SJ01092

  • transcription-direction:
    • negative
  • right-end-position:
    • 161783
  • left-end-position:
    • 156847
  • centisome-position:
    • 14.156517

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6946
    • 6 reactions found over 22 reactions in the full pathway
  • PWY-6944
    • 2 reactions found over 25 reactions in the full pathway
  • PWY-6948
    • 2 reactions found over 18 reactions in the full pathway
  • PWY66-378
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7299
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-4861
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6415
    • 4 reactions found over 7 reactions in the full pathway




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