Difference between revisions of "TRP-tRNAs"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7660 RXN-7660] == * direction: ** reversible * common-name: ** tetrahydrogeranylgeranyl diphosp...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8999 RXN-8999] == * direction: ** left-to-right * common-name: ** di-trans,poly-cis-decaprenyl...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7660 RXN-7660] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8999 RXN-8999] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** tetrahydrogeranylgeranyl diphosphate reductase
+
** di-trans,poly-cis-decaprenyl diphosphate:isopentenyl-diphosphate undecaprenylcistransferase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.5.1.31 ec-2.5.1.31]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADP]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''<=>''' 1 [[CPD-7003]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
+
* 8 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[FARNESYL-PP]][c] '''=>''' 8 [[PPI]][c] '''+''' 1 [[UNDECAPRENYL-DIPHOSPHATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15264]]
+
* Gene: [[SJ20712]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ18388]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5063]], phytyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5063 PWY-5063]
+
* [[PWY-5785]], di-trans,poly-cis-undecaprenyl phosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5785 PWY-5785]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27552 27552]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08756 R08756]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06447 R06447]
−
{{#set: direction=reversible}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07269 R07269]
−
{{#set: common-name=tetrahydrogeranylgeranyl diphosphate reductase}}
+
* UNIPROT:
−
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/O82827 O82827]
 +
** [http://www.uniprot.org/uniprot/O43091 O43091]
 +
** [http://www.uniprot.org/uniprot/Q9JX35 Q9JX35]
 +
** [http://www.uniprot.org/uniprot/O67291 O67291]
 +
** [http://www.uniprot.org/uniprot/Q9X1B8 Q9X1B8]
 +
** [http://www.uniprot.org/uniprot/O34559 O34559]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=di-trans,poly-cis-decaprenyl diphosphate:isopentenyl-diphosphate undecaprenylcistransferase}}
 +
{{#set: ec-number=ec-2.5.1.31}}
 +
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 14:25, 26 August 2019

Reaction RXN-8999

  • direction:
    • left-to-right
  • common-name:
    • di-trans,poly-cis-decaprenyl diphosphate:isopentenyl-diphosphate undecaprenylcistransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5785, di-trans,poly-cis-undecaprenyl phosphate biosynthesis: PWY-5785
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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