Difference between revisions of "TRYPTAMINE"
Jump to navigation
Jump to search
(Created page with "Category:gene == Gene SJ12872 == * transcription-direction: ** positive * right-end-position: ** 328169 * left-end-position: ** 307550 * centisome-position: ** 87.843315...") |
(Created page with "Category:gene == Gene SJ12903 == * transcription-direction: ** positive * right-end-position: ** 116184 * left-end-position: ** 108239 * centisome-position: ** 30.928432...") |
||
| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ12903 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 116184 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 108239 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 30.928432 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[6.1.1.24-RXN]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[GLURS-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-9386]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-5188]] | ||
| + | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[TRNA-CHARGING-PWY]] | ||
| + | ** '''21''' reactions found over '''21''' reactions in the full pathway | ||
| + | * [[PWY-5921]] | ||
| + | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=116184}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=108239}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=30.928432 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| + | {{#set: nb pathway associated=3}} | ||
Revision as of 14:24, 26 August 2019
Contents
Gene SJ12903
- transcription-direction:
- positive
- right-end-position:
- 116184
- left-end-position:
- 108239
- centisome-position:
- 30.928432
Organism(s) associated with this gene
Reaction(s) associated
- 6.1.1.24-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- GLURS-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9386
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-5188
- 6 reactions found over 6 reactions in the full pathway
- TRNA-CHARGING-PWY
- 21 reactions found over 21 reactions in the full pathway
- PWY-5921
- 2 reactions found over 4 reactions in the full pathway
