Difference between revisions of "TRYPTOPHAN--TRNA-LIGASE-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4450 PWYQT-4450] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-3699 ta...")
(Created page with "Category:reaction == Reaction TRYPTOPHAN--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** tryptophan-trna ligase * ec-number: ** [http://enzyme.expasy.o...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4450 PWYQT-4450] ==
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== Reaction TRYPTOPHAN--TRNA-LIGASE-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3699 tax-3699]
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** left-to-right
 
* common-name:
 
* common-name:
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** aliphatic glucosinolate biosynthesis, side chain elongation cycle
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** tryptophan-trna ligase
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-18200]]
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** [http://enzyme.expasy.org/EC/6.1.1.2 ec-6.1.1.2]
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* [[RXN-18202]]
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== Reaction formula ==
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* [[RXN-18204]]
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* 1 [[ATP]][c] '''+''' 1 [[TRP]][c] '''+''' 1 [[TRP-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-TRP-tRNAs]][c] '''+''' 1 [[PPI]][c]
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* [[RXN-18206]]
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== Gene(s) associated with this reaction  ==
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* [[RXN-18208]]
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* Gene: [[SJ20749]]
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== Reaction(s) not found ==
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ21092]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ02283]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Pathway(s) ==
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* [[TRNA-CHARGING-PWY]], tRNA charging:
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18185 RXN-18185]
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* METANETX-RXN : MNXR124075
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18207 RXN-18207]
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* RHEA:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4347 RXNQT-4347]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24081 24081]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18187 RXN-18187]
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* LIGAND-RXN:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4172 RXNQT-4172]
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** [http://www.genome.jp/dbget-bin/www_bget?R03664 R03664]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18188 RXN-18188]
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* UNIPROT:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18184 RXN-18184]
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** [http://www.uniprot.org/uniprot/P23381 P23381]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18205 RXN-18205]
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** [http://www.uniprot.org/uniprot/Q9ZD76 Q9ZD76]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18209 RXN-18209]
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** [http://www.uniprot.org/uniprot/O84589 O84589]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4348 RXNQT-4348]
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** [http://www.uniprot.org/uniprot/Q9PIB4 Q9PIB4]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18190 RXN-18190]
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** [http://www.uniprot.org/uniprot/Q9CJD1 Q9CJD1]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4345 RXNQT-4345]
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** [http://www.uniprot.org/uniprot/P43835 P43835]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4175 RXNQT-4175]
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** [http://www.uniprot.org/uniprot/Q9Z7A4 Q9Z7A4]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4349 RXNQT-4349]
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** [http://www.uniprot.org/uniprot/Q9WYW2 Q9WYW2]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4163 RXNQT-4163]
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** [http://www.uniprot.org/uniprot/O26352 O26352]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18201 RXN-18201]
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** [http://www.uniprot.org/uniprot/O51038 O51038]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18192 RXN-18192]
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** [http://www.uniprot.org/uniprot/Q9ZJX4 Q9ZJX4]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4346 RXNQT-4346]
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** [http://www.uniprot.org/uniprot/Q9JTQ0 Q9JTQ0]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18189 RXN-18189]
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** [http://www.uniprot.org/uniprot/Q58810 Q58810]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18191 RXN-18191]
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** [http://www.uniprot.org/uniprot/O83640 O83640]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18203 RXN-18203]
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** [http://www.uniprot.org/uniprot/P67590 P67590]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4166 RXNQT-4166]
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** [http://www.uniprot.org/uniprot/O67115 O67115]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18193 RXN-18193]
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** [http://www.uniprot.org/uniprot/P47372 P47372]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18186 RXN-18186]
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** [http://www.uniprot.org/uniprot/P32921 P32921]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4169 RXNQT-4169]
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** [http://www.uniprot.org/uniprot/Q12109 Q12109]
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** [http://www.uniprot.org/uniprot/Q49901 Q49901]
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** [http://www.uniprot.org/uniprot/P75510 P75510]
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** [http://www.uniprot.org/uniprot/O42875 O42875]
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** [http://www.uniprot.org/uniprot/O96771 O96771]
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** [http://www.uniprot.org/uniprot/P17248 P17248]
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** [http://www.uniprot.org/uniprot/P21656 P21656]
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** [http://www.uniprot.org/uniprot/P04803 P04803]
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** [http://www.uniprot.org/uniprot/P00954 P00954]
 
</div>
 
</div>
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{{#set: taxonomic-range=tax-3699}}
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{{#set: direction=left-to-right}}
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{{#set: common-name=aliphatic glucosinolate biosynthesis, side chain elongation cycle}}
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{{#set: common-name=tryptophan-trna ligase}}
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{{#set: nb reaction found=5}}
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{{#set: ec-number=ec-6.1.1.2}}
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{{#set: completion rate=0.17}}
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{{#set: nb gene associated=3}}
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{{#set: nb total reaction=30}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction TRYPTOPHAN--TRNA-LIGASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • tryptophan-trna ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRNA-CHARGING-PWY, tRNA charging:
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links





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