Difference between revisions of "TSA-REDUCT-RXN"

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(Created page with "Category:reaction == Reaction RXN-12477 == * direction: ** left-to-right * common-name: ** cytidine4 in trnapro 2'-o-methyltransferase * ec-number: ** [http://enzyme.expas...")
(Created page with "Category:reaction == Reaction biomass_rxn == * direction: ** left-to-right == Reaction formula == * 0.01 4-AMINO-BUTYRATE[c] '''+''' 0.1 ARG[c] '''+''' 0.75 [[ASN]...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-12477 ==
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== Reaction biomass_rxn ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
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* common-name:
 
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** cytidine4 in trnapro 2'-o-methyltransferase
 
−
* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.1.1.225 ec-2.1.1.225]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[Pro-tRNA-Cytidine4]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pro-tRNA-2-O-MeCytidine4]][c]
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* 0.01 [[4-AMINO-BUTYRATE]][c] '''+''' 0.1 [[ARG]][c] '''+''' 0.75 [[ASN]][c] '''+''' 19.3055 [[CIT]][c] '''+''' 0.3 [[CYS]][c] '''+''' 2.7615 [[GLC]][c] '''+''' 10.7 [[GLN]][c] '''+''' 18.85 [[GLT]][c] '''+''' 3.8 [[GLY]][c] '''+''' 0.123 [[GLYCERATE]][c] '''+''' 2.375 [[GLYCEROL]][c] '''+''' 0.029 [[GLYCOLLATE]][c] '''+''' 0.1 [[HIS]][c] '''+''' 0.2 [[ILE]][c] '''+''' 26.6 [[L-ALPHA-ALANINE]][c] '''+''' 12.5 [[L-ASPARTATE]][c] '''+''' 0.1 [[L-ORNITHINE]][c] '''+''' 0.3 [[LEU]][c] '''+''' 0.35 [[LYS]][c] '''+''' 331.4 [[MANNITOL]][c] '''+''' 0.3 [[MET]][c] '''+''' 0.35 [[PHE]][c] '''+''' 1.35 [[PRO]][c] '''+''' 3.35 [[SER]][c] '''+''' 0.878 [[SUC]][c] '''+''' 0.65 [[THR]][c] '''+''' 9.37 [[THREO-DS-ISO-CITRATE]][c] '''+''' 0.115 [[TRP]][c] '''+''' 0.125 [[TYR]][c] '''+''' 0.85 [[VAL]][c] '''=>''' 1 [[BIOMASS]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ07716]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-6829]], tRNA methylation (yeast):
 
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** '''11''' reactions found over '''15''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[biomass_reaction]]; tool: [[curation]]; comment: forfba
 
== External links  ==
 
== External links  ==
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32768 32768]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: common-name=cytidine4 in trnapro 2'-o-methyltransferase}}
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{{#set: nb gene associated=0}}
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{{#set: ec-number=ec-2.1.1.225}}
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{{#set: nb pathway associated=0}}
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{{#set: nb gene associated=1}}
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{{#set: reconstruction category=manual}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction tool=curation}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction comment=forfba}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=biomass_reaction}}
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 08:35, 15 March 2021

Reaction biomass_rxn

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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