Difference between revisions of "TSA-REDUCT-RXN"

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(Created page with "Category:reaction == Reaction biomass_rxn == * direction: ** left-to-right == Reaction formula == * 0.01 4-AMINO-BUTYRATE[c] '''+''' 0.1 ARG[c] '''+''' 0.75 [[ASN]...")
(Created page with "Category:reaction == Reaction TSA-REDUCT-RXN == * direction: ** left-to-right * common-name: ** tartronate semialdehyde reductase * ec-number: ** [http://enzyme.expasy.org...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction biomass_rxn ==
+
== Reaction TSA-REDUCT-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** tartronate semialdehyde reductase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.60 ec-1.1.1.60]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 0.01 [[4-AMINO-BUTYRATE]][c] '''+''' 0.1 [[ARG]][c] '''+''' 0.75 [[ASN]][c] '''+''' 19.3055 [[CIT]][c] '''+''' 0.3 [[CYS]][c] '''+''' 2.7615 [[GLC]][c] '''+''' 10.7 [[GLN]][c] '''+''' 18.85 [[GLT]][c] '''+''' 3.8 [[GLY]][c] '''+''' 0.123 [[GLYCERATE]][c] '''+''' 2.375 [[GLYCEROL]][c] '''+''' 0.029 [[GLYCOLLATE]][c] '''+''' 0.1 [[HIS]][c] '''+''' 0.2 [[ILE]][c] '''+''' 26.6 [[L-ALPHA-ALANINE]][c] '''+''' 12.5 [[L-ASPARTATE]][c] '''+''' 0.1 [[L-ORNITHINE]][c] '''+''' 0.3 [[LEU]][c] '''+''' 0.35 [[LYS]][c] '''+''' 331.4 [[MANNITOL]][c] '''+''' 0.3 [[MET]][c] '''+''' 0.35 [[PHE]][c] '''+''' 1.35 [[PRO]][c] '''+''' 3.35 [[SER]][c] '''+''' 0.878 [[SUC]][c] '''+''' 0.65 [[THR]][c] '''+''' 9.37 [[THREO-DS-ISO-CITRATE]][c] '''+''' 0.115 [[TRP]][c] '''+''' 0.125 [[TYR]][c] '''+''' 0.85 [[VAL]][c] '''=>''' 1 [[BIOMASS]][c]
+
* 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TARTRONATE-S-ALD]][c] '''=>''' 1 [[GLYCERATE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ16180]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[GALACTARDEG-PWY]], D-galactarate degradation I:
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[GLUCARDEG-PWY]], D-glucarate degradation I:
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[biomass_reaction]]; tool: [[curation]]; comment: forfba
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR124078
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18843 18843]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01747 R01747]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=0}}
+
{{#set: common-name=tartronate semialdehyde reductase}}
−
{{#set: nb pathway associated=0}}
+
{{#set: ec-number=ec-1.1.1.60}}
−
{{#set: reconstruction category=manual}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction comment=forfba}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=biomass_reaction}}
+
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction TSA-REDUCT-RXN

  • direction:
    • left-to-right
  • common-name:
    • tartronate semialdehyde reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • GALACTARDEG-PWY, D-galactarate degradation I:
    • 1 reactions found over 4 reactions in the full pathway
  • GLUCARDEG-PWY, D-glucarate degradation I:
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR124078
  • RHEA:
  • LIGAND-RXN:





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