Difference between revisions of "TSA-REDUCT-RXN"

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(Created page with "Category:reaction == Reaction RXN-13697 == * direction: ** reversible * common-name: ** aspartate aminotransferase ** l-phenylalanine:2-oxoglutarate aminotransferase * ec-...")
(Created page with "Category:reaction == Reaction TSA-REDUCT-RXN == * direction: ** left-to-right * common-name: ** tartronate semialdehyde reductase * ec-number: ** [http://enzyme.expasy.org...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-13697 ==
+
== Reaction TSA-REDUCT-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** aspartate aminotransferase
+
** tartronate semialdehyde reductase
−
** l-phenylalanine:2-oxoglutarate aminotransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.1 ec-2.6.1.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.60 ec-1.1.1.60]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ASPARTATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[OXALACETIC_ACID]][c]
+
* 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TARTRONATE-S-ALD]][c] '''=>''' 1 [[GLYCERATE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04188]]
+
* Gene: [[SJ16180]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ20943]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ07646]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ05778]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08678]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type:
+
* [[GALACTARDEG-PWY]], D-galactarate degradation I:
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type:
+
* [[GLUCARDEG-PWY]], D-glucarate degradation I:
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* METANETX-RXN : MNXR124078
−
{{#set: common-name=l-phenylalanine:2-oxoglutarate aminotransferase|aspartate aminotransferase}}
+
* RHEA:
−
{{#set: ec-number=ec-2.6.1.1}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18843 18843]
−
{{#set: nb gene associated=5}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01747 R01747]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=tartronate semialdehyde reductase}}
 +
{{#set: ec-number=ec-1.1.1.60}}
 +
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction TSA-REDUCT-RXN

  • direction:
    • left-to-right
  • common-name:
    • tartronate semialdehyde reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • GALACTARDEG-PWY, D-galactarate degradation I:
    • 1 reactions found over 4 reactions in the full pathway
  • GLUCARDEG-PWY, D-glucarate degradation I:
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR124078
  • RHEA:
  • LIGAND-RXN:





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