Difference between revisions of "TYROSINE-AMINOTRANSFERASE-RXN"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14494 RXN-14494] == * direction: ** left-to-right * common-name: ** 3-hydroxy-lesqueroloyl-coa...") |
(Created page with "Category:reaction == Reaction TYROSINE-AMINOTRANSFERASE-RXN == * direction: ** reversible * common-name: ** l-phenylalanine:2-oxoglutarate aminotransferase ** l-tyrosine:2...") |
||
(7 intermediate revisions by 2 users not shown) | |||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction TYROSINE-AMINOTRANSFERASE-RXN == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
* common-name: | * common-name: | ||
− | ** | + | ** l-phenylalanine:2-oxoglutarate aminotransferase |
+ | ** l-tyrosine:2-oxoglutarate aminotransferase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.6.1.57 ec-2.6.1.57] |
+ | ** [http://enzyme.expasy.org/EC/2.6.1.5 ec-2.6.1.5] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[TYR]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[P-HYDROXY-PHENYLPYRUVATE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * Gene: [[SJ04188]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[SJ20943]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ07466]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ05778]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ07646]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** ''' | + | * [[PWY-7518]], atromentin biosynthesis: |
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-3581]], (S)-reticuline biosynthesis I: | ||
+ | ** '''6''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY3O-4108]], L-tyrosine degradation III: | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5048]], rosmarinic acid biosynthesis I: | ||
+ | ** '''1''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[TYRFUMCAT-PWY]], L-tyrosine degradation I: | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7514]], L-tyrosine degradation IV (to 4-methylphenol): | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5886]], 3-(4-hydroxyphenyl)pyruvate biosynthesis: | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[TYRSYN]], L-tyrosine biosynthesis I: | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5754]], 4-hydroxybenzoate biosynthesis I (eukaryotes): | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-5151]], L-tyrosine degradation II: | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | </div> | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: common-name= | + | * METANETX-RXN : MNXR105000 |
− | {{#set: ec-number=ec- | + | * RHEA: |
− | {{#set: nb gene associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15096 15096] |
− | {{#set: nb pathway associated= | + | * UNIPROT: |
− | {{#set: reconstruction category=annotation}} | + | ** [http://www.uniprot.org/uniprot/P74861 P74861] |
− | {{#set: reconstruction tool=pathwaytools}} | + | ** [http://www.uniprot.org/uniprot/Q9UWK8 Q9UWK8] |
+ | ** [http://www.uniprot.org/uniprot/Q9UWK9 Q9UWK9] | ||
+ | ** [http://www.uniprot.org/uniprot/P95468 P95468] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JYA1 Q9JYA1] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JT83 Q9JT83] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UZ63 Q9UZ63] | ||
+ | ** [http://www.uniprot.org/uniprot/O58489 O58489] | ||
+ | ** [http://www.uniprot.org/uniprot/O59096 O59096] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PHA8 Q9PHA8] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9V0L2 Q9V0L2] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z7G5 Q9Z7G5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02636 Q02636] | ||
+ | ** [http://www.uniprot.org/uniprot/O84642 O84642] | ||
+ | ** [http://www.uniprot.org/uniprot/P17735 P17735] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M4A9 Q7M4A9] | ||
+ | ** [http://www.uniprot.org/uniprot/P04693 P04693] | ||
+ | ** [http://www.uniprot.org/uniprot/P04694 P04694] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00734 R00734] | ||
+ | </div> | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=l-phenylalanine:2-oxoglutarate aminotransferase|l-tyrosine:2-oxoglutarate aminotransferase}} | ||
+ | {{#set: ec-number=ec-2.6.1.57|ec-2.6.1.5}} | ||
+ | {{#set: nb gene associated=5}} | ||
+ | {{#set: nb pathway associated=10}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}} |
Latest revision as of 11:20, 18 March 2021
Contents
Reaction TYROSINE-AMINOTRANSFERASE-RXN
- direction:
- reversible
- common-name:
- l-phenylalanine:2-oxoglutarate aminotransferase
- l-tyrosine:2-oxoglutarate aminotransferase
- ec-number:
Reaction formula
- 1 2-KETOGLUTARATE[c] + 1 TYR[c] <=> 1 GLT[c] + 1 P-HYDROXY-PHENYLPYRUVATE[c]
Gene(s) associated with this reaction
- Gene: SJ04188
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ20943
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ07466
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ05778
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ07646
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7518, atromentin biosynthesis:
- 1 reactions found over 2 reactions in the full pathway
- PWY-3581, (S)-reticuline biosynthesis I:
- 6 reactions found over 11 reactions in the full pathway
- PWY3O-4108, L-tyrosine degradation III:
- 2 reactions found over 4 reactions in the full pathway
- PWY-5048, rosmarinic acid biosynthesis I:
- 1 reactions found over 10 reactions in the full pathway
- TYRFUMCAT-PWY, L-tyrosine degradation I:
- 2 reactions found over 5 reactions in the full pathway
- PWY-7514, L-tyrosine degradation IV (to 4-methylphenol):
- 1 reactions found over 3 reactions in the full pathway
- PWY-5886, 3-(4-hydroxyphenyl)pyruvate biosynthesis:
- 1 reactions found over 1 reactions in the full pathway
- TYRSYN, L-tyrosine biosynthesis I:
- 3 reactions found over 3 reactions in the full pathway
- PWY-5754, 4-hydroxybenzoate biosynthesis I (eukaryotes):
- 2 reactions found over 5 reactions in the full pathway
- PWY-5151, L-tyrosine degradation II:
- 1 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
External links