Difference between revisions of "TYROSINE-DECARBOXYLASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-16630 == * direction: ** left-to-right * common-name: ** (11z)-3-oxo-icos-11-enoyl-[acp] reductase ** 3-oxoacyl-[acyl-carrier-protein] re...")
(Created page with "Category:reaction == Reaction RXN-11921 == * direction: ** left-to-right * common-name: ** 3-methylcrotonyl-coa:acetyl-coa c-acyltransferase * ec-number: ** [http://enzyme...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-16630 ==
+
== Reaction RXN-11921 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** (11z)-3-oxo-icos-11-enoyl-[acp] reductase
+
** 3-methylcrotonyl-coa:acetyl-coa c-acyltransferase
−
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
+
** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
 +
* synonymous:
 +
** 5-methyl-3-oxo-4-hexenoyl-coa thiolase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[11Z-3-oxo-icos-11-enoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3R-11Z-3-hydroxy-icos-11-enoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[CO-A]][c] '''+''' 1 [[CPD-12906]][c] '''=>''' 1 [[3-METHYL-CROTONYL-COA]][c] '''+''' 1 [[ACETYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13014]]
+
* Gene: [[SJ09371]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21818]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ17743]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ04229]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7663]], gondoate biosynthesis (anaerobic):
+
* [[PWY-6672]], cis-genanyl-CoA degradation:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R08095 R08095]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] reductase (nadph)|(11z)-3-oxo-icos-11-enoyl-[acp] reductase}}
+
{{#set: common-name=3-methylcrotonyl-coa:acetyl-coa c-acyltransferase}}
−
{{#set: ec-number=ec-1.1.1.100}}
+
{{#set: ec-number=ec-2.3.1}}
−
{{#set: nb gene associated=3}}
+
{{#set: synonymous=5-methyl-3-oxo-4-hexenoyl-coa thiolase}}
 +
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:17, 14 January 2021

Reaction RXN-11921

  • direction:
    • left-to-right
  • common-name:
    • 3-methylcrotonyl-coa:acetyl-coa c-acyltransferase
  • ec-number:
  • synonymous:
    • 5-methyl-3-oxo-4-hexenoyl-coa thiolase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6672, cis-genanyl-CoA degradation:
    • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

External links






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