Difference between revisions of "Thiopurines"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRYPSYN-RXN TRYPSYN-RXN] == * direction: ** left-to-right * common-name: ** tryptophan synthase * e...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NUCLEOSIDE-DIP-KIN-RXN NUCLEOSIDE-DIP-KIN-RXN] == * direction: ** left-to-right * common-name: ** n...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRYPSYN-RXN TRYPSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NUCLEOSIDE-DIP-KIN-RXN NUCLEOSIDE-DIP-KIN-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** tryptophan synthase
+
** nucleoside diphosphate kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.20 ec-4.2.1.20]
+
** [http://enzyme.expasy.org/EC/2.7.4.6 ec-2.7.4.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[INDOLE-3-GLYCEROL-P]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[GAP]][c] '''+''' 1 [[TRP]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[Nucleoside-Diphosphates]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Nucleoside-Triphosphates]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09991]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ07124]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ16706]]
+
* Gene: [[SJ21705]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ20325]]
+
* Gene: [[SJ20794]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21816]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ15468]]
+
* Gene: [[SJ08159]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ10955]]
+
* Gene: [[SJ21967]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16893]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ20076]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ10125]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10533 10533]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18114 18114]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02722 R02722]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00331 R00331]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P11081 P11081]
+
** [http://www.uniprot.org/uniprot/P15531 P15531]
−
** [http://www.uniprot.org/uniprot/P14671 P14671]
+
** [http://www.uniprot.org/uniprot/P15266 P15266]
−
** [http://www.uniprot.org/uniprot/P13228 P13228]
+
** [http://www.uniprot.org/uniprot/P19804 P19804]
−
** [http://www.uniprot.org/uniprot/P18284 P18284]
+
** [http://www.uniprot.org/uniprot/Q05982 Q05982]
−
** [http://www.uniprot.org/uniprot/P43759 P43759]
+
** [http://www.uniprot.org/uniprot/P15532 P15532]
−
** [http://www.uniprot.org/uniprot/O84172 O84172]
+
** [http://www.uniprot.org/uniprot/P22887 P22887]
−
** [http://www.uniprot.org/uniprot/P11080 P11080]
+
** [http://www.uniprot.org/uniprot/P22392 P22392]
−
** [http://www.uniprot.org/uniprot/P16608 P16608]
+
** [http://www.uniprot.org/uniprot/P65533 P65533]
−
** [http://www.uniprot.org/uniprot/P18285 P18285]
+
** [http://www.uniprot.org/uniprot/O84508 O84508]
−
** [http://www.uniprot.org/uniprot/P16706 P16706]
+
** [http://www.uniprot.org/uniprot/P84284 P84284]
−
** [http://www.uniprot.org/uniprot/P12290 P12290]
+
** [http://www.uniprot.org/uniprot/P43802 P43802]
−
** [http://www.uniprot.org/uniprot/P42391 P42391]
+
** [http://www.uniprot.org/uniprot/O26358 O26358]
−
** [http://www.uniprot.org/uniprot/Q9PIF2 Q9PIF2]
+
** [http://www.uniprot.org/uniprot/P56075 P56075]
−
** [http://www.uniprot.org/uniprot/P12291 P12291]
+
** [http://www.uniprot.org/uniprot/O67528 O67528]
−
** [http://www.uniprot.org/uniprot/P42389 P42389]
+
** [http://www.uniprot.org/uniprot/O83974 O83974]
−
** [http://www.uniprot.org/uniprot/Q60179 Q60179]
+
** [http://www.uniprot.org/uniprot/O29491 O29491]
−
** [http://www.uniprot.org/uniprot/Q9PIF1 Q9PIF1]
+
** [http://www.uniprot.org/uniprot/Q9ZE91 Q9ZE91]
−
** [http://www.uniprot.org/uniprot/P07600 P07600]
+
** [http://www.uniprot.org/uniprot/Q58661 Q58661]
−
** [http://www.uniprot.org/uniprot/P07601 P07601]
+
** [http://www.uniprot.org/uniprot/Q9PIG7 Q9PIG7]
−
** [http://www.uniprot.org/uniprot/P06561 P06561]
+
** [http://www.uniprot.org/uniprot/Q13232 Q13232]
−
** [http://www.uniprot.org/uniprot/P56142 P56142]
+
** [http://www.uniprot.org/uniprot/P48817 P48817]
−
** [http://www.uniprot.org/uniprot/P06562 P06562]
+
** [http://www.uniprot.org/uniprot/P0A763 P0A763]
−
** [http://www.uniprot.org/uniprot/O27696 O27696]
+
** [http://www.uniprot.org/uniprot/P08879 P08879]
−
** [http://www.uniprot.org/uniprot/O28672 O28672]
+
** [http://www.uniprot.org/uniprot/Q02254 Q02254]
−
** [http://www.uniprot.org/uniprot/O66923 O66923]
+
** [http://www.uniprot.org/uniprot/Q01402 Q01402]
−
** [http://www.uniprot.org/uniprot/Q9JVC0 Q9JVC0]
+
** [http://www.uniprot.org/uniprot/Q01768 Q01768]
−
** [http://www.uniprot.org/uniprot/P43760 P43760]
+
** [http://www.uniprot.org/uniprot/P47922 P47922]
−
** [http://www.uniprot.org/uniprot/P34817 P34817]
+
** [http://www.uniprot.org/uniprot/P36010 P36010]
−
** [http://www.uniprot.org/uniprot/P34816 P34816]
+
** [http://www.uniprot.org/uniprot/Q07661 Q07661]
−
** [http://www.uniprot.org/uniprot/P17167 P17167]
+
** [http://www.uniprot.org/uniprot/Q9S8M2 Q9S8M2]
−
** [http://www.uniprot.org/uniprot/P17166 P17166]
+
** [http://www.uniprot.org/uniprot/P47921 P47921]
−
** [http://www.uniprot.org/uniprot/P19868 P19868]
+
** [http://www.uniprot.org/uniprot/P47923 P47923]
−
** [http://www.uniprot.org/uniprot/P19867 P19867]
+
** [http://www.uniprot.org/uniprot/P81766 P81766]
−
** [http://www.uniprot.org/uniprot/P16578 P16578]
+
** [http://www.uniprot.org/uniprot/P50589 P50589]
−
** [http://www.uniprot.org/uniprot/P43283 P43283]
+
** [http://www.uniprot.org/uniprot/P74494 P74494]
−
** [http://www.uniprot.org/uniprot/P43284 P43284]
+
** [http://www.uniprot.org/uniprot/Q59636 Q59636]
−
** [http://www.uniprot.org/uniprot/Q57011 Q57011]
+
** [http://www.uniprot.org/uniprot/O49203 O49203]
−
** [http://www.uniprot.org/uniprot/P31204 P31204]
+
** [http://www.uniprot.org/uniprot/Q39839 Q39839]
−
** [http://www.uniprot.org/uniprot/Q01998 Q01998]
+
** [http://www.uniprot.org/uniprot/Q96559 Q96559]
−
** [http://www.uniprot.org/uniprot/Q01997 Q01997]
+
** [http://www.uniprot.org/uniprot/P39207 P39207]
−
** [http://www.uniprot.org/uniprot/P34793 P34793]
+
** [http://www.uniprot.org/uniprot/Q9ZGE0 Q9ZGE0]
−
** [http://www.uniprot.org/uniprot/P42390 P42390]
+
** [http://www.uniprot.org/uniprot/P49740 P49740]
−
** [http://www.uniprot.org/uniprot/P50909 P50909]
+
** [http://www.uniprot.org/uniprot/Q9UUY8 Q9UUY8]
−
** [http://www.uniprot.org/uniprot/Q42529 Q42529]
+
** [http://www.uniprot.org/uniprot/O64903 O64903]
−
** [http://www.uniprot.org/uniprot/P51382 P51382]
 
−
** [http://www.uniprot.org/uniprot/P77960 P77960]
 
−
** [http://www.uniprot.org/uniprot/Q59992 Q59992]
 
−
** [http://www.uniprot.org/uniprot/O22765 O22765]
 
−
** [http://www.uniprot.org/uniprot/O04225 O04225]
 
−
** [http://www.uniprot.org/uniprot/P25269 P25269]
 
−
** [http://www.uniprot.org/uniprot/O64991 O64991]
 
−
** [http://www.uniprot.org/uniprot/O05625 O05625]
 
−
** [http://www.uniprot.org/uniprot/O13831 O13831]
 
−
** [http://www.uniprot.org/uniprot/Q9YGB0 Q9YGB0]
 
−
** [http://www.uniprot.org/uniprot/Q9YGA9 Q9YGA9]
 
−
** [http://www.uniprot.org/uniprot/Q9X7C8 Q9X7C8]
 
−
** [http://www.uniprot.org/uniprot/P00931 P00931]
 
−
** [http://www.uniprot.org/uniprot/P00929 P00929]
 
−
** [http://www.uniprot.org/uniprot/P0A2K1 P0A2K1]
 
−
** [http://www.uniprot.org/uniprot/P0A877 P0A877]
 
−
** [http://www.uniprot.org/uniprot/P0A879 P0A879]
 
 
</div>
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=tryptophan synthase}}
+
{{#set: common-name=nucleoside diphosphate kinase}}
−
{{#set: ec-number=ec-4.2.1.20}}
+
{{#set: ec-number=ec-2.7.4.6}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=9}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 09:29, 27 August 2019

Reaction NUCLEOSIDE-DIP-KIN-RXN

  • direction:
    • left-to-right
  • common-name:
    • nucleoside diphosphate kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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