Difference between revisions of "Trans-3-enoyl-CoAs"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.271-RXN 1.1.1.271-RXN] == * direction: ** left-to-right * common-name: ** gdp-fucose synthase...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN4FS-2 RXN4FS-2] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2....")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.271-RXN 1.1.1.271-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN4FS-2 RXN4FS-2] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** gdp-fucose synthase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.271 ec-1.1.1.271]
+
** [http://enzyme.expasy.org/EC/2.1.1.71 ec-2.1.1.71]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GDP-4-DEHYDRO-6-DEOXY-D-MANNOSE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-13118]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[CPD-160]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PHOSPHATIDYLCHOLINE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05880]]
+
* Gene: [[SJ18438]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ04932]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-66]], GDP-L-fucose biosynthesis I (from GDP-D-mannose): [http://metacyc.org/META/NEW-IMAGE?object=PWY-66 PWY-66]
+
* [[PWY-6825]], phosphatidylcholine biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6825 PWY-6825]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY4FS-4]], phosphatidylcholine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-4 PWY4FS-4]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY4FS-3]], phosphatidylcholine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-3 PWY4FS-3]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18887 18887]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32740 32740]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R05692 R05692]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=gdp-fucose synthase}}
+
{{#set: ec-number=ec-2.1.1.71}}
−
{{#set: ec-number=ec-1.1.1.271}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 09:29, 27 August 2019

Reaction RXN4FS-2

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6825, phosphatidylcholine biosynthesis V: PWY-6825
    • 3 reactions found over 3 reactions in the full pathway
  • PWY4FS-4, phosphatidylcholine biosynthesis IV: PWY4FS-4
    • 1 reactions found over 5 reactions in the full pathway
  • PWY4FS-3, phosphatidylcholine biosynthesis III: PWY4FS-3
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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