Difference between revisions of "TransportSeed-CARBON-DIOXIDE"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11480 RXN-11480] == * direction: ** left-to-right * common-name: ** 3-oxo-pimeloyl-[acp] methyl...")
(Created page with "Category:reaction == Reaction RXN-12625 == * direction: ** left-to-right * common-name: ** n,n'-diacetylchitobiose β-n-acetylglucosaminidase * ec-number: ** [http://e...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11480 RXN-11480] ==
+
== Reaction RXN-12625 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-oxo-pimeloyl-[acp] methyl ester reductase
+
** n,n'-diacetylchitobiose β-n-acetylglucosaminidase
−
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
+
** [http://enzyme.expasy.org/EC/3.2.1.52 ec-3.2.1.52]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-Ketopimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-hydroxypimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[CHITOBIOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[N-acetyl-D-glucosamine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17743]]
+
* Gene: [[SJ10675]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ04229]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ13014]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519]
+
* [[PWY-7822]], chitin degradation III (Serratia):
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6902]], chitin degradation II (Vibrio):
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00022 R00022]
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30674 30674]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-oxo-pimeloyl-[acp] methyl ester reductase|3-oxoacyl-[acyl-carrier-protein] reductase (nadph)}}
+
{{#set: common-name=n,n'-diacetylchitobiose β-n-acetylglucosaminidase}}
−
{{#set: ec-number=ec-1.1.1.100}}
+
{{#set: ec-number=ec-3.2.1.52}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:39, 18 December 2020

Reaction RXN-12625

  • direction:
    • left-to-right
  • common-name:
    • n,n'-diacetylchitobiose β-n-acetylglucosaminidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7822, chitin degradation III (Serratia):
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6902, chitin degradation II (Vibrio):
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=TransportSeed-CARBON-DIOXIDE&oldid=48967"