Difference between revisions of "TransportSeed-CU+2"
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(Created page with "Category:reaction == Reaction RXN-16616 == * direction: ** left-to-right * common-name: ** (5z)-3-oxo-tetradec-5-enoyl-[acyl-carrier-protein] reductase ** 3-oxoacyl-[acyl-...") |
(Created page with "Category:reaction == Reaction RXN0-6427 == * direction: ** left-to-right * common-name: ** guanosine-3',5'-bis(diphosphate) 3'-diphosphatase ** guanosine 3'-diphosphate 5'...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction RXN0-6427 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** guanosine-3',5'-bis(diphosphate) 3'-diphosphatase |
− | ** 3- | + | ** guanosine 3'-diphosphate 5'-triphosphate 3'-diphosphatase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.1.7.2 ec-3.1.7.2] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[GDP-TP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GTP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ10100]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[SJ13961]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | ** Category: [[ | + | * Gene: [[SJ14690]] |
− | *** Source: [[ | + | ** Category: [[annotation]] |
− | * Gene: [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
+ | * Gene: [[SJ07200]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY | + | * [[PPGPPMET-PWY]], ppGpp metabolism: |
− | ** ''' | + | ** '''5''' reactions found over '''6''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
− | |||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33056 33056] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name=3- | + | {{#set: common-name=guanosine 3'-diphosphate 5'-triphosphate 3'-diphosphatase|guanosine-3',5'-bis(diphosphate) 3'-diphosphatase}} |
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-3.1.7.2}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=4}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
− | {{#set: reconstruction category=annotation | + | {{#set: reconstruction category=annotation}} |
− | {{#set: reconstruction tool=pathwaytools | + | {{#set: reconstruction tool=pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome | + | {{#set: reconstruction source=saccharina_japonica_genome}} |
Revision as of 15:31, 5 January 2021
Contents
Reaction RXN0-6427
- direction:
- left-to-right
- common-name:
- guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
- guanosine 3'-diphosphate 5'-triphosphate 3'-diphosphatase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ10100
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ13961
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ14690
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ07200
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- PPGPPMET-PWY, ppGpp metabolism:
- 5 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA: