Difference between revisions of "TransportSeed-CU+2"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FATTY-ACID-PEROXIDASE-RXN FATTY-ACID-PEROXIDASE-RXN] == * direction: ** left-to-right * ec-number:...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11501 RXN-11501] == * direction: ** left-to-right * common-name: ** alpha-galactosidase * ec-nu...") |
||
| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11501 RXN-11501] == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| + | * common-name: | ||
| + | ** alpha-galactosidase | ||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.2.1.22 ec-3.2.1.22] |
== Reaction formula == | == Reaction formula == | ||
| − | * | + | * 1 [[CPD-170]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ALPHA-D-GALACTOSE]][c] '''+''' 1 [[CPD-1099]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| + | * Gene: [[SJ02145]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ02144]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
| + | * Gene: [[SJ05258]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527] | ||
| + | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[ | + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| − | |||
| − | |||
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03634 R03634] |
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: ec-number=ec- | + | {{#set: common-name=alpha-galactosidase}} |
| − | {{#set: nb gene associated= | + | {{#set: ec-number=ec-3.2.1.22}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb gene associated=3}} |
| − | {{#set: reconstruction category= | + | {{#set: nb pathway associated=1}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction comment= | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
| − | {{#set: reconstruction source= | + | {{#set: reconstruction comment=n.a}} |
| + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} | ||
Revision as of 09:30, 27 August 2019
Contents
Reaction RXN-11501
- direction:
- left-to-right
- common-name:
- alpha-galactosidase
- ec-number:
Reaction formula
- 1 CPD-170[c] + 1 WATER[c] => 1 ALPHA-D-GALACTOSE[c] + 1 CPD-1099[c]
Gene(s) associated with this reaction
- Gene: SJ02145
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ02144
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ05258
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- LIGAND-RXN:
