Difference between revisions of "TransportSeed-EDTA"
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(Created page with "Category:reaction == Reaction RXN-6763 == * direction: ** left-to-right * common-name: ** cysteine conjugate β-lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.4....") |
(Created page with "Category:reaction == Reaction METHYLVALERATE-RXN == * direction: ** reversible * common-name: ** 3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring)...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction METHYLVALERATE-RXN == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
* common-name: | * common-name: | ||
− | ** | + | ** 3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring) |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/4.4. | + | ** [http://enzyme.expasy.org/EC/1.2.4.4 ec-1.2.4.4] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[BCAA-dehydrogenase-2MB-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ18449]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ11017]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | |||
− | |||
− | |||
− | |||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | |
− | |||
* UNIPROT: | * UNIPROT: | ||
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P21839 P21839] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P21953 P21953] |
− | * | + | ** [http://www.uniprot.org/uniprot/P37940 P37940] |
− | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54] |
− | {{#set: direction= | + | ** [http://www.uniprot.org/uniprot/P37941 P37941] |
− | {{#set: common-name= | + | ** [http://www.uniprot.org/uniprot/P11178 P11178] |
− | {{#set: ec-number=ec-4.4 | + | ** [http://www.uniprot.org/uniprot/P12694 P12694] |
− | {{#set: nb gene associated= | + | ** [http://www.uniprot.org/uniprot/P09061 P09061] |
− | {{#set: nb pathway associated= | + | ** [http://www.uniprot.org/uniprot/P09060 P09060] |
− | {{#set: reconstruction category=annotation}} | + | ** [http://www.uniprot.org/uniprot/P11960 P11960] |
− | {{#set: reconstruction tool=pathwaytools}} | + | ** [http://www.uniprot.org/uniprot/O84344 O84344] |
+ | ** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2] | ||
+ | ** [http://www.uniprot.org/uniprot/P35738 P35738] | ||
+ | ** [http://www.uniprot.org/uniprot/P50136 P50136] | ||
+ | ** [http://www.uniprot.org/uniprot/O48615 O48615] | ||
+ | ** [http://www.uniprot.org/uniprot/O03849 O03849] | ||
+ | ** [http://www.uniprot.org/uniprot/Q53592 Q53592] | ||
+ | ** [http://www.uniprot.org/uniprot/Q53593 Q53593] | ||
+ | ** [http://www.uniprot.org/uniprot/O82450 O82450] | ||
+ | </div> | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring)}} | ||
+ | {{#set: ec-number=ec-1.2.4.4}} | ||
+ | {{#set: nb gene associated=2}} | ||
+ | {{#set: nb pathway associated=0}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:38, 5 January 2021
Contents
Reaction METHYLVALERATE-RXN
- direction:
- reversible
- common-name:
- 3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring)
- ec-number:
Reaction formula
- 1 2-KETO-3-METHYL-VALERATE[c] + 1 BCAA-dehydrogenase-lipoyl[c] + 1 PROTON[c] <=> 1 BCAA-dehydrogenase-2MB-DH-lipoyl[c] + 1 CARBON-DIOXIDE[c]
Gene(s) associated with this reaction
- Gene: SJ18449
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ11017
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
Property "Common-name" (as page type) with input value "3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.