Difference between revisions of "TransportSeed-FE+2"
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(Created page with "Category:reaction == Reaction RXN-22205 == * direction: ** left-to-right == Reaction formula == * 1.0 CPD-24183[c] '''=>''' 1.0 CPD-24184[c] == Gene(s) associated...") |
(Created page with "Category:reaction == Reaction RXN-8025 == * direction: ** left-to-right * synonymous: ** β-carotene 3,3′-monooxygenase ** crtz == Reaction formula == * 1 CPD1...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN- | + | == Reaction RXN-8025 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| + | * synonymous: | ||
| + | ** β-carotene 3,3′-monooxygenase | ||
| + | ** crtz | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 | + | * 1 [[CPD1F-129]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD-7409]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| + | * Gene: [[SJ07227]] | ||
| + | ** Category: [[manual]] | ||
| + | *** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls) | ||
| + | * Gene: [[SJ07228]] | ||
| + | ** Category: [[manual]] | ||
| + | *** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls) | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-7638]], echinenone and zeaxanthin biosynthesis (Synechocystis): |
| − | ** ''' | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
| + | * [[PWY-5944]], zeaxanthin biosynthesis: | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-5288]], astaxanthin biosynthesis (bacteria, fungi, algae): | ||
| + | ** '''2''' reactions found over '''10''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[manual]]; source: [[ | + | * category: [[manual]]; source: [[sjap]]; tool: [[curation]]; comment: transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate) |
== External links == | == External links == | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R07558 R07558] | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30326 30326] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: nb gene associated= | + | {{#set: synonymous=crtz|β-carotene 3,3′-monooxygenase}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb gene associated=2}} |
| + | {{#set: nb pathway associated=3}} | ||
{{#set: reconstruction category=manual}} | {{#set: reconstruction category=manual}} | ||
{{#set: reconstruction tool=curation}} | {{#set: reconstruction tool=curation}} | ||
| − | {{#set: reconstruction comment= | + | {{#set: reconstruction comment=transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)}} |
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=sjap}} |
Revision as of 15:05, 5 January 2021
Contents
Reaction RXN-8025
- direction:
- left-to-right
- synonymous:
- β-carotene 3,3′-monooxygenase
- crtz
Reaction formula
- 1 CPD1F-129[c] + 1 OXYGEN-MOLECULE[c] + 2 PROTON[c] + 2 Reduced-ferredoxins[c] => 1 CPD-7409[c] + 2 Oxidized-ferredoxins[c] + 1 WATER[c]
Gene(s) associated with this reaction
- Gene: SJ07227
- Category: manual
- Source: sjap, Tool: unknown-tool, Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
- Category: manual
- Gene: SJ07228
- Category: manual
- Source: sjap, Tool: unknown-tool, Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
- Category: manual
Pathway(s)
- PWY-7638, echinenone and zeaxanthin biosynthesis (Synechocystis):
- 2 reactions found over 4 reactions in the full pathway
- PWY-5944, zeaxanthin biosynthesis:
- 2 reactions found over 2 reactions in the full pathway
- PWY-5288, astaxanthin biosynthesis (bacteria, fungi, algae):
- 2 reactions found over 10 reactions in the full pathway
Reconstruction information
- category: manual; source: sjap; tool: curation; comment: transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)
External links
