Difference between revisions of "TransportSeed-FE+3"

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(Created page with "Category:reaction == Reaction RXN1F-160 == * direction: ** left-to-right * common-name: ** ent-7α-hydroxykaur-16-en-19-oate monooxygenase == Reaction formula == * 1...")
(Created page with "Category:reaction == Reaction RXN-8347 == * direction: ** left-to-right * common-name: ** α-linolenate δ6-desaturase ** α-linolenoyl-lipid 6-desaturase *...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN1F-160 ==
+
== Reaction RXN-8347 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** ent-7α-hydroxykaur-16-en-19-oate monooxygenase
+
** α-linolenate δ6-desaturase
 +
** α-linolenoyl-lipid 6-desaturase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.14.19.47 ec-1.14.19.47]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD1F-136]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD1F-138]][c] '''+''' 1 [[NADP]][c] '''+''' 2 [[WATER]][c]
+
* 1 [[Alpha-linolenoyl-groups]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-17278]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05072]]
+
* Gene: [[SJ05483]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5047]], gibberellin biosynthesis IV (Gibberella fujikuroi):
+
* [[PWY-6603]], dicranin biosynthesis:
−
** '''6''' reactions found over '''15''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5034]], GA12 biosynthesis:
+
* [[PWY-6958]], icosapentaenoate biosynthesis I (lower eukaryotes):
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''5''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22905 22905]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=46289 46289]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06295 R06295]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07861 R07861]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=ent-7α-hydroxykaur-16-en-19-oate monooxygenase}}
+
{{#set: common-name=α-linolenoyl-lipid 6-desaturase|α-linolenate δ6-desaturase}}
 +
{{#set: ec-number=ec-1.14.19.47}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:33, 5 January 2021

Reaction RXN-8347

  • direction:
    • left-to-right
  • common-name:
    • α-linolenate δ6-desaturase
    • α-linolenoyl-lipid 6-desaturase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6603, dicranin biosynthesis:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6958, icosapentaenoate biosynthesis I (lower eukaryotes):
    • 5 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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