Difference between revisions of "TransportSeed-MN+2"

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(Created page with "Category:reaction == Reaction GALACTOKIN-RXN == * direction: ** reversible * common-name: ** galactokinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.6 ec-2.7.1.6]...")
(Created page with "Category:reaction == Reaction RXN-15287 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/6.1.2.2 ec-6.1.2.2] == Reaction formula == * 1 [[ATP]...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction GALACTOKIN-RXN ==
+
== Reaction RXN-15287 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** galactokinase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.6 ec-2.7.1.6]
+
** [http://enzyme.expasy.org/EC/6.1.2.2 ec-6.1.2.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ALPHA-D-GALACTOSE]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[GALACTOSE-1P]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CARBAMOYL-P]][c] '''+''' 1 [[CPD-4822]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-14159]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17935]]
+
* Gene: [[SJ02092]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19552]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13010]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-3821]], D-galactose detoxification:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6527]], stachyose degradation:
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6317]], D-galactose degradation I (Leloir pathway):
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY66-422]]:
 
−
** '''5''' reactions found over '''n.a''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13556 13556]
+
{{#set: ec-number=ec-6.1.2.2}}
−
* LIGAND-RXN:
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{{#set: nb gene associated=1}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01092 R01092]
+
{{#set: nb pathway associated=0}}
−
* UNIPROT:
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P09608 P09608]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/Q01415 Q01415]
 
−
** [http://www.uniprot.org/uniprot/P22713 P22713]
 
−
** [http://www.uniprot.org/uniprot/P31767 P31767]
 
−
** [http://www.uniprot.org/uniprot/Q8X7P4 Q8X7P4]
 
−
** [http://www.uniprot.org/uniprot/Q9R7D7 Q9R7D7]
 
−
** [http://www.uniprot.org/uniprot/P96993 P96993]
 
−
** [http://www.uniprot.org/uniprot/P04385 P04385]
 
−
** [http://www.uniprot.org/uniprot/P0A6T3 P0A6T3]
 
−
** [http://www.uniprot.org/uniprot/P13227 P13227]
 
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** [http://www.uniprot.org/uniprot/P39574 P39574]
 
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** [http://www.uniprot.org/uniprot/P13045 P13045]
 
−
** [http://www.uniprot.org/uniprot/Q9SEE5 Q9SEE5]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=galactokinase}}
 
−
{{#set: ec-number=ec-2.7.1.6}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:20, 14 January 2021

Reaction RXN-15287

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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