Difference between revisions of "TransportSeed-OXYGEN-MOLECULE"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15740 RXN-15740] == * direction: ** left-to-right * common-name: ** glycerol-3-phosphate dehydr...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4181-CPD-4101/DIMETHYL-GLYCINE//EPISTEROL/BETAINE.45. RXN-4181-CPD-4101/DIMETHYL-GLYCINE//EPIST...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15740 RXN-15740] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4181-CPD-4101/DIMETHYL-GLYCINE//EPISTEROL/BETAINE.45. RXN-4181-CPD-4101/DIMETHYL-GLYCINE//EPISTEROL/BETAINE.45.] ==
 
* direction:
 
* direction:
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** left-to-right
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** reversible
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* common-name:
 
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** glycerol-3-phosphate dehydrogenase, anaerobic
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/1.1.5.3 ec-1.1.5.3]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[GLYCEROL-3P]][c] '''+''' 1 [[Menaquinones]][c] '''=>''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[Menaquinols]][c]
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* 1.0 [[CPD-4101]][c] '''+''' 1.0 [[DIMETHYL-GLYCINE]][c] '''<=>''' 1.0 [[BETAINE]][c] '''+''' 1.0 [[EPISTEROL]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ18572]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY0-1582]], glycerol-3-phosphate to fumarate electron transfer: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1582 PWY0-1582]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY0-1581]], nitrate reduction IX (dissimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1581 PWY0-1581]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY0-1591]], glycerol-3-phosphate to hydrogen peroxide electron transport: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1591 PWY0-1591]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29220 29220]
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{{#set: nb gene associated=0}}
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{{#set: direction=left-to-right}}
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{{#set: nb pathway associated=0}}
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{{#set: common-name=glycerol-3-phosphate dehydrogenase, anaerobic}}
+
{{#set: reconstruction category=gap-filling}}
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{{#set: ec-number=ec-1.1.5.3}}
+
{{#set: reconstruction tool=meneco}}
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{{#set: nb gene associated=1}}
+
{{#set: reconstruction comment=added for gapfilling}}
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{{#set: nb pathway associated=3}}
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 09:30, 27 August 2019

Reaction RXN-4181-CPD-4101/DIMETHYL-GLYCINE//EPISTEROL/BETAINE.45.

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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