Difference between revisions of "TransportSeed-SULFATE"

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(Created page with "Category:reaction == Reaction RXN0-5180 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1] == Reaction formula == * 1 DELTA3-I...")
(Created page with "Category:reaction == Reaction RXN-11627 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.212 ec-2.4.1.212] == Reaction formula == * 1 Hya...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-5180 ==
+
== Reaction RXN-11627 ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1]
+
** [http://enzyme.expasy.org/EC/2.4.1.212 ec-2.4.1.212]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[FARNESYL-PP]][c] '''=>''' 1 [[CPD0-1028]][c] '''+''' 1 [[PPI]][c]
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* 1 [[Hyaluronan-glucuronate-terminal]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''<=>''' 1 [[Hyaluronan-NAc-glucosaminide]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ06835]]
* Gene: [[SJ10418]]
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** Category: [[annotation]]
** Category: [[orthology]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ03479]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ18388]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ04442]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ10781]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ19255]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5815]], rubber biosynthesis:
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
+
* METANETX-RXN : MNXR117054
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31282 31282]
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{{#set: direction=reversible}}
* LIGAND-RXN:
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{{#set: ec-number=ec-2.4.1.212}}
** [http://www.genome.jp/dbget-bin/www_bget?R05555 R05555]
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{{#set: nb gene associated=1}}
{{#set: direction=left-to-right}}
+
{{#set: nb pathway associated=0}}
{{#set: ec-number=ec-2.5.1}}
+
{{#set: reconstruction category=annotation}}
{{#set: nb gene associated=6}}
+
{{#set: reconstruction tool=pathwaytools}}
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:38, 15 March 2021

Reaction RXN-11627

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR117054