Difference between revisions of "TransportSeed-THIAMINE"

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(Created page with "Category:reaction == Reaction RXN-16625 == * direction: ** left-to-right * common-name: ** 3-oxoacyl-[acyl-carrier-protein] synthase * ec-number: ** [http://enzyme.expasy....")
(Created page with "Category:reaction == Reaction TransportSeed-THIAMINE == * direction: ** left-to-right == Reaction formula == * 1.0 THIAMINE[e] '''=>''' 1.0 THIAMINE[c] == Gene(s)...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-16625 ==
+
== Reaction TransportSeed-THIAMINE ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
 
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[7Z-hexadec-7-enoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[9Z-3-oxo-octadec-9-enoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* 1.0 [[THIAMINE]][e] '''=>''' 1.0 [[THIAMINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* Gene: [[SJ00005]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ15984]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ10624]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ04443]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ06617]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ15983]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ18059]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7664]], oleate biosynthesis IV (anaerobic):
 
** '''13''' reactions found over '''14''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from extracellular to cytosol compartment
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] synthase}}
+
{{#set: nb gene associated=0}}
{{#set: ec-number=ec-2.3.1.41|ec-2.3.1.179}}
+
{{#set: nb pathway associated=0}}
{{#set: nb gene associated=7}}
+
{{#set: reconstruction category=manual}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction source=import_from_medium}}
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:23, 18 March 2021

Reaction TransportSeed-THIAMINE

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links