Difference between revisions of "TransportSeed-THIAMINE"

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(Created page with "Category:reaction == Reaction 6.3.5.7-RXN == * direction: ** left-to-right * common-name: ** glutaminyl-trna synthase (glutamine-hydrolyzing) ** glutamyl-trna(gln) amidotr...")
(Created page with "Category:reaction == Reaction TransportSeed-THIAMINE == * direction: ** left-to-right == Reaction formula == * 1.0 THIAMINE[e] '''=>''' 1.0 THIAMINE[c] == Gene(s)...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 6.3.5.7-RXN ==
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== Reaction TransportSeed-THIAMINE ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** glutaminyl-trna synthase (glutamine-hydrolyzing)
 
** glutamyl-trna(gln) amidotransferase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/6.3.5.7 ec-6.3.5.7]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[L-glutamyl-tRNAGln]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Charged-GLN-tRNAs]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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* 1.0 [[THIAMINE]][e] '''=>''' 1.0 [[THIAMINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* Gene: [[SJ08904]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ16279]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ05621]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ01848]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ22527]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ11756]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ08903]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5921]], glutaminyl-tRNAgln biosynthesis via transamidation:
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from extracellular to cytosol compartment
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17522 17522]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03905 R03905]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=glutaminyl-trna synthase (glutamine-hydrolyzing)|glutamyl-trna(gln) amidotransferase}}
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{{#set: nb gene associated=0}}
{{#set: ec-number=ec-6.3.5.7}}
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{{#set: nb pathway associated=0}}
{{#set: nb gene associated=7}}
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{{#set: reconstruction category=manual}}
{{#set: nb pathway associated=1}}
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{{#set: reconstruction tool=curation}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=import_from_medium}}
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Latest revision as of 11:23, 18 March 2021

Reaction TransportSeed-THIAMINE

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links