Difference between revisions of "TransportSeed-THIAMINE"

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(Created page with "Category:reaction == Reaction RXN-5581 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.5 ec-1.2.1.5] == Reaction formula == * 1 INDOL...")
(Created page with "Category:reaction == Reaction TransportSeed-THIAMINE == * direction: ** left-to-right == Reaction formula == * 1.0 THIAMINE[e] '''=>''' 1.0 THIAMINE[c] == Gene(s)...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-5581 ==
+
== Reaction TransportSeed-THIAMINE ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.2.1.5 ec-1.2.1.5]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[INDOLE_ACETALDEHYDE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INDOLE_ACETATE_AUXIN]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 2 [[PROTON]][c]
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* 1.0 [[THIAMINE]][e] '''=>''' 1.0 [[THIAMINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ06456]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ06470]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-3162]], L-tryptophan degradation V (side chain pathway):
 
** '''2''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from extracellular to cytosol compartment
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30868 30868]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-1.2.1.5}}
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{{#set: nb gene associated=0}}
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=import_from_medium}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:23, 18 March 2021

Reaction TransportSeed-THIAMINE

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links