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| | [[Category:reaction]] | | [[Category:reaction]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.46-RXN 3.1.3.46-RXN] == | + | == Reaction TransportSeed-WATER == |
| | * direction: | | * direction: |
| | ** left-to-right | | ** left-to-right |
| − | * common-name:
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| − | ** fructose-2,6-bisphosphatase
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| − | * ec-number:
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| − | ** [http://enzyme.expasy.org/EC/3.1.3.46 ec-3.1.3.46]
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| | == Reaction formula == | | == Reaction formula == |
| − | * 1 [[CPD-535]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[Pi]][c] | + | * 1.0 [[WATER]][e] '''=>''' 1.0 [[WATER]][c] |
| | == Gene(s) associated with this reaction == | | == Gene(s) associated with this reaction == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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| − | * Gene: [[SJ16286]]
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | * Gene: [[SJ09480]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | * Gene: [[SJ21480]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ12299]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ03483]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ04557]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ09481]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ12908]]
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | * Gene: [[SJ11840]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | </div>
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| | == Pathway(s) == | | == Pathway(s) == |
| − | * [[PWY66-423]], fructose 2,6-bisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-423 PWY66-423]
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| − | ** '''2''' reactions found over '''2''' reactions in the full pathway
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| | == Reconstruction information == | | == Reconstruction information == |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | + | * category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from extracellular to cytosol compartment |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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| − | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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| − | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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| | == External links == | | == External links == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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| − | * RHEA:
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| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17290 17290]
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| − | * LIGAND-RXN:
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| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00763 R00763]
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| − | * UNIPROT:
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| − | ** [http://www.uniprot.org/uniprot/P26285 P26285]
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| − | ** [http://www.uniprot.org/uniprot/P25114 P25114]
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| − | ** [http://www.uniprot.org/uniprot/Q7M3I3 Q7M3I3]
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| − | ** [http://www.uniprot.org/uniprot/P49872 P49872]
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| − | ** [http://www.uniprot.org/uniprot/Q28830 Q28830]
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| − | ** [http://www.uniprot.org/uniprot/Q91348 Q91348]
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| − | ** [http://www.uniprot.org/uniprot/Q9JJH5 Q9JJH5]
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| − | ** [http://www.uniprot.org/uniprot/Q16875 Q16875]
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| − | ** [http://www.uniprot.org/uniprot/P07953 P07953]
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| − | ** [http://www.uniprot.org/uniprot/P16118 P16118]
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| − | ** [http://www.uniprot.org/uniprot/P32604 P32604]
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| − | ** [http://www.uniprot.org/uniprot/P70265 P70265]
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| − | ** [http://www.uniprot.org/uniprot/P70266 P70266]
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| − | ** [http://www.uniprot.org/uniprot/O24559 O24559]
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| − | ** [http://www.uniprot.org/uniprot/O81398 O81398]
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| − | ** [http://www.uniprot.org/uniprot/O64983 O64983]
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| − | ** [http://www.uniprot.org/uniprot/Q9URZ7 Q9URZ7]
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| − | </div>
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| | {{#set: direction=left-to-right}} | | {{#set: direction=left-to-right}} |
| − | {{#set: common-name=fructose-2,6-bisphosphatase}}
| + | {{#set: nb gene associated=0}} |
| − | {{#set: ec-number=ec-3.1.3.46}}
| + | {{#set: nb pathway associated=0}} |
| − | {{#set: nb gene associated=9}} | + | {{#set: reconstruction category=manual}} |
| − | {{#set: nb pathway associated=1}} | + | {{#set: reconstruction tool=curation}} |
| − | {{#set: reconstruction category=annotation|orthology}} | + | {{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}} |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}} | + | {{#set: reconstruction source=import_from_medium}} |
| − | {{#set: reconstruction comment=n.a}} | |
| − | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}} | |
