Difference between revisions of "UDP-GLUCURONATE-4-EPIMERASE-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] *...")
(Created page with "Category:reaction == Reaction RXN-11322 == * direction: ** left-to-right * common-name: ** pyridoxal 5'-phosphate synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.3...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622] ==
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== Reaction RXN-11322 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
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** left-to-right
 
* common-name:
 
* common-name:
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** formaldehyde assimilation i (serine pathway)
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** pyridoxal 5'-phosphate synthase
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== Reaction(s) found ==
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* ec-number:
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* [[2PGADEHYDRAT-RXN]]
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** [http://enzyme.expasy.org/EC/4.3.3.6 ec-4.3.3.6]
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* [[GLYOHMETRANS-RXN]]
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* synonymous:
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* [[HYDROXYPYRUVATE-REDUCTASE-RXN]]
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** glutamine amidotransferase subunit pdxt
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* [[MALATE-DEH-RXN]]
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** pyridoxal 5'-phosphate synthase subunit pdxs
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* [[PEPCARBOX-RXN]]
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== Reaction formula ==
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* [[RXN-15513]]
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* 1 [[CPD-15895]][c] '''+''' 1 [[GAP]][c] '''+''' 1 [[GLN]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''+''' 1 [[Pi]][c] '''+''' 3 [[WATER]][c]
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== Reaction(s) not found ==
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2881 RXN-2881]
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* Gene: [[SJ10267]]
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* [http://metacyc.org/META/NEW-IMAGE?object=MALATE--COA-LIGASE-RXN MALATE--COA-LIGASE-RXN]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=MALYL-COA-LYASE-RXN MALYL-COA-LYASE-RXN]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN]
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* Gene: [[SJ19163]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2802 RXN-2802]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=GKI-RXN GKI-RXN]
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== Pathway(s) ==
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{{#set: taxonomic-range=tax-2}}
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* [[PWY-6466]], pyridoxal 5'-phosphate biosynthesis II:
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{{#set: common-name=formaldehyde assimilation i (serine pathway)}}
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** '''1''' reactions found over '''1''' reactions in the full pathway
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{{#set: nb reaction found=6}}
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== Reconstruction information  ==
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{{#set: completion rate=0.46}}
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: nb total reaction=13}}
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31508 31508]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R07456 R07456]
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{{#set: direction=left-to-right}}
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{{#set: common-name=pyridoxal 5'-phosphate synthase}}
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{{#set: ec-number=ec-4.3.3.6}}
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{{#set: synonymous=glutamine amidotransferase subunit pdxt|pyridoxal 5'-phosphate synthase subunit pdxs}}
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{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:44, 18 December 2020

Reaction RXN-11322

  • direction:
    • left-to-right
  • common-name:
    • pyridoxal 5'-phosphate synthase
  • ec-number:
  • synonymous:
    • glutamine amidotransferase subunit pdxt
    • pyridoxal 5'-phosphate synthase subunit pdxs

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6466, pyridoxal 5'-phosphate biosynthesis II:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links






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