Difference between revisions of "UDP-GLUCURONATE-4-EPIMERASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-11322 == * direction: ** left-to-right * common-name: ** pyridoxal 5'-phosphate synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.3...")
(Created page with "Category:reaction == Reaction RXN-12200 == * direction: ** left-to-right * common-name: ** nucleoside-triphosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.6.1.5 e...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-11322 ==
+
== Reaction RXN-12200 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** pyridoxal 5'-phosphate synthase
+
** nucleoside-triphosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.3.3.6 ec-4.3.3.6]
+
** [http://enzyme.expasy.org/EC/3.6.1.5 ec-3.6.1.5]
−
* synonymous:
 
−
** glutamine amidotransferase subunit pdxt
 
−
** pyridoxal 5'-phosphate synthase subunit pdxs
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-15895]][c] '''+''' 1 [[GAP]][c] '''+''' 1 [[GLN]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''+''' 1 [[Pi]][c] '''+''' 3 [[WATER]][c]
+
* 1 [[CTP]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[CMP]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10267]]
+
* Gene: [[SJ00842]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ19163]]
+
* Gene: [[SJ16444]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6466]], pyridoxal 5'-phosphate biosynthesis II:
+
* [[PWY-7185]], UTP and CTP dephosphorylation I:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7177]], UTP and CTP dephosphorylation II:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31508 31508]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R07456 R07456]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=pyridoxal 5'-phosphate synthase}}
+
{{#set: common-name=nucleoside-triphosphatase}}
−
{{#set: ec-number=ec-4.3.3.6}}
+
{{#set: ec-number=ec-3.6.1.5}}
−
{{#set: synonymous=glutamine amidotransferase subunit pdxt|pyridoxal 5'-phosphate synthase subunit pdxs}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:05, 5 January 2021

Reaction RXN-12200

  • direction:
    • left-to-right
  • common-name:
    • nucleoside-triphosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7185, UTP and CTP dephosphorylation I:
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7177, UTP and CTP dephosphorylation II:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=UDP-GLUCURONATE-4-EPIMERASE-RXN&oldid=64046"