Difference between revisions of "UDPNACETYLMURAMATEDEHYDROG-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8032 RXN-8032] == * direction: ** reversible * common-name: ** 3-ketopimelyl-coa thiolase * ec-...")
(Created page with "Category:reaction == Reaction UDPNACETYLMURAMATEDEHYDROG-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.3.1.98 ec-1.3.1.98] == Reactio...")
 
(8 intermediate revisions by 4 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8032 RXN-8032] ==
+
== Reaction UDPNACETYLMURAMATEDEHYDROG-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** 3-ketopimelyl-coa thiolase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
+
** [http://enzyme.expasy.org/EC/1.3.1.98 ec-1.3.1.98]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-OXOPIMELOYL-COA]][c] '''+''' 1 [[CO-A]][c] '''<=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[GLUTARYL-COA]][c]
+
* 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP-ACETYL-CARBOXYVINYL-GLUCOSAMINE]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[UDP-N-ACETYLMURAMATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15041]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ03311]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21113]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21111]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21294]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19720]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03315]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21114]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ20537]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P321-PWY]], benzoyl-CoA degradation III (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P321-PWY P321-PWY]
+
* [[PWY-6387]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing):
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7401 PWY-7401]
+
* [[PWY0-1261]], anhydromuropeptides recycling I:
−
** '''6''' reactions found over '''15''' reactions in the full pathway
+
** '''3''' reactions found over '''12''' reactions in the full pathway
−
* [[CENTBENZCOA-PWY]], benzoyl-CoA degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=CENTBENZCOA-PWY CENTBENZCOA-PWY]
+
* [[PWY-7953]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis III (meso-diaminopimelate containing):
−
** '''1''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6386]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing):
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR141027
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12250 12250]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05586 R05586]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03192 R03192]
−
{{#set: direction=reversible}}
+
* UNIPROT:
−
{{#set: common-name=3-ketopimelyl-coa thiolase}}
+
** [http://www.uniprot.org/uniprot/Q9PM01 Q9PM01]
−
{{#set: ec-number=ec-2.3.1}}
+
** [http://www.uniprot.org/uniprot/Q9JV28 Q9JV28]
−
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/P44605 P44605]
−
{{#set: nb pathway associated=3}}
+
** [http://www.uniprot.org/uniprot/P08373 P08373]
 +
{{#set: direction=left-to-right}}
 +
{{#set: ec-number=ec-1.3.1.98}}
 +
{{#set: nb gene associated=8}}
 +
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Latest revision as of 11:20, 18 March 2021

Reaction UDPNACETYLMURAMATEDEHYDROG-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6387, UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing):
    • 2 reactions found over 8 reactions in the full pathway
  • PWY0-1261, anhydromuropeptides recycling I:
    • 3 reactions found over 12 reactions in the full pathway
  • PWY-7953, UDP-N-acetylmuramoyl-pentapeptide biosynthesis III (meso-diaminopimelate containing):
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6386, UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing):
    • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=UDPNACETYLMURAMATEDEHYDROG-RXN&oldid=141008"