Difference between revisions of "UG6PGTn"

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(Created page with "Category:reaction == Reaction UDP-N-ACETYLGLUCOSAMINE-4-EPIMERASE-RXN == * direction: ** reversible * common-name: ** udp-n-acetylglucosamine 4-epimerase * ec-number: ** [...")
(Created page with "Category:reaction == Reaction RXN66-13 == * direction: ** left-to-right * common-name: ** 4,4-dimethyl-14α-formyl-5α-cholesta-8-en-3β-ol deformylase ** 4,...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction UDP-N-ACETYLGLUCOSAMINE-4-EPIMERASE-RXN ==
+
== Reaction RXN66-13 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** udp-n-acetylglucosamine 4-epimerase
+
** 4,4-dimethyl-14α-formyl-5α-cholesta-8-en-3β-ol deformylase
−
* ec-number:
+
** 4,4-dimethyl-14α-formyl-5α-cholesta-8-en-3β-ol,nadph:oxygen oxidoreductase
−
** [http://enzyme.expasy.org/EC/5.1.3.7 ec-5.1.3.7]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''<=>''' 1 [[CPD-14795]][c]
+
* 1 [[CPD-8608]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-8609]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16452]]
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* Gene: [[SJ05072]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5512]], UDP-N-acetyl-D-galactosamine biosynthesis I:
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* [[PWY66-3]], cholesterol biosynthesis II (via 24,25-dihydrolanosterol):
−
** '''1''' reactions found over '''1''' reactions in the full pathway
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** '''12''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY-7820]], teichuronic acid biosynthesis (B. subtilis 168):
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II:
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR144152
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20520 20520]
+
{{#set: direction=left-to-right}}
−
* LIGAND-RXN:
+
{{#set: common-name=4,4-dimethyl-14&alpha;-formyl-5&alpha;-cholesta-8-en-3&beta;-ol deformylase|4,4-dimethyl-14&alpha;-formyl-5&alpha;-cholesta-8-en-3&beta;-ol,nadph:oxygen oxidoreductase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00418 R00418]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=udp-n-acetylglucosamine 4-epimerase}}
 
−
{{#set: ec-number=ec-5.1.3.7}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 08:37, 15 March 2021

Reaction RXN66-13

  • direction:
    • left-to-right
  • common-name:
    • 4,4-dimethyl-14α-formyl-5α-cholesta-8-en-3β-ol deformylase
    • 4,4-dimethyl-14α-formyl-5α-cholesta-8-en-3β-ol,nadph:oxygen oxidoreductase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-3, cholesterol biosynthesis II (via 24,25-dihydrolanosterol):
    • 12 reactions found over 18 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR144152





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