Difference between revisions of "UG6PGTn"

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(Created page with "Category:reaction == Reaction RXN-10814 == * direction: ** reversible * common-name: ** l-phenylalanine aminotransferase ** l-phenylalanine:2-oxoglutarate aminotransferase...")
(Created page with "Category:reaction == Reaction RXN-11488 == * direction: ** left-to-right * common-name: ** geranylgeranyl-diphosphate tri-trans,poly-cis-undecaprenyl-diphosphate synthase...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-10814 ==
+
== Reaction RXN-11488 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** l-phenylalanine aminotransferase
+
** geranylgeranyl-diphosphate tri-trans,poly-cis-undecaprenyl-diphosphate synthase
−
** l-phenylalanine:2-oxoglutarate aminotransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.1 ec-2.6.1.1]
+
** [http://enzyme.expasy.org/EC/2.5.1.89 ec-2.5.1.89]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[PHE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[PHENYL-PYRUVATE]][c]
+
* 7 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[CPD-12461]][c] '''+''' 7 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08678]]
+
* Gene: [[SJ18388]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ20943]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ04188]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ05778]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07646]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6318]], L-phenylalanine degradation IV (mammalian, via side chain):
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P04693 P04693]
 
−
** [http://www.uniprot.org/uniprot/P74861 P74861]
 
−
** [http://www.uniprot.org/uniprot/Q9UWK8 Q9UWK8]
 
−
** [http://www.uniprot.org/uniprot/Q9UWK9 Q9UWK9]
 
−
** [http://www.uniprot.org/uniprot/P95468 P95468]
 
−
** [http://www.uniprot.org/uniprot/Q9JYA1 Q9JYA1]
 
−
** [http://www.uniprot.org/uniprot/Q9JT83 Q9JT83]
 
−
** [http://www.uniprot.org/uniprot/Q9UZ63 Q9UZ63]
 
−
** [http://www.uniprot.org/uniprot/O58489 O58489]
 
−
** [http://www.uniprot.org/uniprot/O59096 O59096]
 
−
** [http://www.uniprot.org/uniprot/Q9PHA8 Q9PHA8]
 
−
** [http://www.uniprot.org/uniprot/Q9V0L2 Q9V0L2]
 
−
** [http://www.uniprot.org/uniprot/Q9Z7G5 Q9Z7G5]
 
−
** [http://www.uniprot.org/uniprot/Q02636 Q02636]
 
−
** [http://www.uniprot.org/uniprot/O84642 O84642]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00694 R00694]
+
** [http://www.genome.jp/dbget-bin/www_bget?R09730 R09730]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25155 25155]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27625 27625]
−
</div>
+
{{#set: direction=left-to-right}}
−
{{#set: direction=reversible}}
+
{{#set: common-name=geranylgeranyl-diphosphate tri-trans,poly-cis-undecaprenyl-diphosphate synthase}}
−
{{#set: common-name=l-phenylalanine aminotransferase|l-phenylalanine:2-oxoglutarate aminotransferase}}
+
{{#set: ec-number=ec-2.5.1.89}}
−
{{#set: ec-number=ec-2.6.1.1}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:18, 14 January 2021

Reaction RXN-11488

  • direction:
    • left-to-right
  • common-name:
    • geranylgeranyl-diphosphate tri-trans,poly-cis-undecaprenyl-diphosphate synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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