Difference between revisions of "UGDC"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTACONYL-COA-DECARBOXYLASE-RXN GLUTACONYL-COA-DECARBOXYLASE-RXN] == * direction: ** reversible *...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-ACYLGLYCEROL-O-ACYLTRANSFERASE-RXN-CPD66-43/STEAROYL-COA//CPD-17271/CO-A.38. 2-ACYLGLYCEROL-O-ACY...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTACONYL-COA-DECARBOXYLASE-RXN GLUTACONYL-COA-DECARBOXYLASE-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-ACYLGLYCEROL-O-ACYLTRANSFERASE-RXN-CPD66-43/STEAROYL-COA//CPD-17271/CO-A.38. 2-ACYLGLYCEROL-O-ACYLTRANSFERASE-RXN-CPD66-43/STEAROYL-COA//CPD-17271/CO-A.38.] ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
* common-name:
 
** glutaconyl-coa decarboxylase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/4.1.1.70 ec-4.1.1.70]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[GLUTACONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CROTONYL-COA]][c]
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* 1.0 [[CPD66-43]][c] '''+''' 1.0 [[STEAROYL-COA]][c] '''<=>''' 1.0 [[CO-A]][c] '''+''' 1.0 [[CPD-17271]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ07909]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5177]], glutaryl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5177 PWY-5177]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate): [http://metacyc.org/META/NEW-IMAGE?object=P162-PWY P162-PWY]
 
** '''7''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7401 PWY-7401]
 
** '''6''' reactions found over '''15''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23972 23972]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03028 R03028]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
{{#set: common-name=glutaconyl-coa decarboxylase}}
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{{#set: nb gene associated=0}}
{{#set: ec-number=ec-4.1.1.70}}
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{{#set: nb pathway associated=0}}
{{#set: nb gene associated=1}}
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{{#set: reconstruction category=gap-filling}}
{{#set: nb pathway associated=3}}
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{{#set: reconstruction tool=meneco}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction comment=added for gapfilling}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 14:29, 26 August 2019

Reaction 2-ACYLGLYCEROL-O-ACYLTRANSFERASE-RXN-CPD66-43/STEAROYL-COA//CPD-17271/CO-A.38.

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links