Difference between revisions of "URA-PHOSPH-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction NADH-DEHYDROGENASE-QUINONE-RXN == * direction: ** left-to-right * common-name: ** nadh dehydrogenase (quinone) * ec-number: ** [http://enzyme...")
(Created page with "Category:reaction == Reaction URA-PHOSPH-RXN == * direction: ** reversible * common-name: ** uracil phosphorylase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.3 ec-2...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction NADH-DEHYDROGENASE-QUINONE-RXN ==
+
== Reaction URA-PHOSPH-RXN ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
** nadh dehydrogenase (quinone)
+
** uracil phosphorylase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.6.5.11 ec-1.6.5.11]
+
** [http://enzyme.expasy.org/EC/2.4.2.3 ec-2.4.2.3]
 +
** [http://enzyme.expasy.org/EC/2.4.2.2 ec-2.4.2.2]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-3766]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[MENADIOL]][c] '''+''' 1 [[NAD]][c]
+
* 1 [[DEOXYURIDINE]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[DEOXY-D-RIBOSE-1-PHOSPHATE]][c] '''+''' 1 [[URACIL]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ03195]]
* Gene: [[SJ15310]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ16410]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ14995]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ05715]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ10422]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ21017]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ21333]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ19412]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ02471]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ09960]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ22333]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7181]], pyrimidine deoxyribonucleosides degradation:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR97818
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22827 22827]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R02964 R02964]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02484 R02484]
{{#set: direction=left-to-right}}
+
{{#set: direction=reversible}}
{{#set: common-name=nadh dehydrogenase (quinone)}}
+
{{#set: common-name=uracil phosphorylase}}
{{#set: ec-number=ec-1.6.5.11}}
+
{{#set: ec-number=ec-2.4.2.2|ec-2.4.2.3}}
{{#set: nb gene associated=11}}
+
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction URA-PHOSPH-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7181, pyrimidine deoxyribonucleosides degradation:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR97818
  • RHEA:
  • LIGAND-RXN: