Difference between revisions of "URA-PHOSPH-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-12199 == * direction: ** left-to-right * common-name: ** nucleoside-triphosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.6.1.5 e...")
(Created page with "Category:reaction == Reaction URA-PHOSPH-RXN == * direction: ** reversible * common-name: ** uracil phosphorylase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.3 ec-2...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12199 ==
+
== Reaction URA-PHOSPH-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** nucleoside-triphosphatase
+
** uracil phosphorylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.6.1.5 ec-3.6.1.5]
+
** [http://enzyme.expasy.org/EC/2.4.2.3 ec-2.4.2.3]
 +
** [http://enzyme.expasy.org/EC/2.4.2.2 ec-2.4.2.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[UTP]][c] '''+''' 2 [[WATER]][c] '''=>''' 2 [[PROTON]][c] '''+''' 2 [[Pi]][c] '''+''' 1 [[UMP]][c]
+
* 1 [[DEOXYURIDINE]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[DEOXY-D-RIBOSE-1-PHOSPHATE]][c] '''+''' 1 [[URACIL]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00842]]
+
* Gene: [[SJ03195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ16444]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7185]], UTP and CTP dephosphorylation I:
+
* [[PWY-7181]], pyrimidine deoxyribonucleosides degradation:
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7177]], UTP and CTP dephosphorylation II:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR105174
+
* METANETX-RXN : MNXR97818
−
{{#set: direction=left-to-right}}
+
* RHEA:
−
{{#set: common-name=nucleoside-triphosphatase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22827 22827]
−
{{#set: ec-number=ec-3.6.1.5}}
+
* LIGAND-RXN:
−
{{#set: nb gene associated=2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02484 R02484]
−
{{#set: nb pathway associated=2}}
+
{{#set: direction=reversible}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: common-name=uracil phosphorylase}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: ec-number=ec-2.4.2.2|ec-2.4.2.3}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction URA-PHOSPH-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7181, pyrimidine deoxyribonucleosides degradation:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR97818
  • RHEA:
  • LIGAND-RXN:





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=URA-PHOSPH-RXN&oldid=142353"