Difference between revisions of "UREA"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.3-RXN 1.3.7.3-RXN] == * direction: ** left-to-right * common-name: ** phycoerythrobilin:ferre...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TransportSeed-NITRATE TransportSeed-NITRATE] == * direction: ** left-to-right == Reaction formula =...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.3-RXN 1.3.7.3-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TransportSeed-NITRATE TransportSeed-NITRATE] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
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* common-name:
 
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** phycoerythrobilin:ferredoxin oxidoreductase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/1.3.7.3 ec-1.3.7.3]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[1516-DIHYDROBILIVERDIN]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[3Z-PHYCOERYTHROBILIN]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
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* 1.0 [[NITRATE]][e] '''=>''' 1.0 [[NITRATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ04581]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-5915]], phycoerythrobilin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5915 PWY-5915]
 
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** '''3''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-7579]], phycourobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579]
 
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** '''3''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[unknown-tool]]; comment: added to manage seeds from extracellular to cytosol compartment
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22094 22094]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R05819 R05819]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: common-name=phycoerythrobilin:ferredoxin oxidoreductase}}
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{{#set: nb gene associated=0}}
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{{#set: ec-number=ec-1.3.7.3}}
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{{#set: nb pathway associated=0}}
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{{#set: nb gene associated=1}}
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{{#set: reconstruction category=manual}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction tool=unknown-tool}}
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{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction source=import_from_medium}}
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Revision as of 14:25, 26 August 2019

Reaction TransportSeed-NITRATE

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=UREA&oldid=22320"