Difference between revisions of "URIDINE"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11578 RXN-11578] == * direction: ** left-to-right * common-name: ** 16s rrna m7g527 methyltrans...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-66 RXN1F-66] == * direction: ** reversible * common-name: ** chlorophyll synthetase * ec-numb...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-66 RXN1F-66] == |
* direction: | * direction: | ||
| − | ** | + | ** reversible |
* common-name: | * common-name: | ||
| − | ** | + | ** chlorophyll synthetase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.5.1.62 ec-2.5.1.62] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CHLOROPHYLL-A]][c] '''+''' 1 [[PPI]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ07213]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-7764]], chlorophyll a biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7764 PWY-7764] | ||
| + | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-5086]], chlorophyll a biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5086 PWY-5086] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-5068]], chlorophyll cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068] | ||
| + | ** '''4''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17320 17320] |
| − | {{#set: direction= | + | * LIGAND-RXN: |
| − | {{#set: common-name= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R06284 R06284] |
| − | {{#set: ec-number=ec-2. | + | {{#set: direction=reversible}} |
| + | {{#set: common-name=chlorophyll synthetase}} | ||
| + | {{#set: ec-number=ec-2.5.1.62}} | ||
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}} |
Revision as of 09:28, 27 August 2019
Contents
Reaction RXN1F-66
- direction:
- reversible
- common-name:
- chlorophyll synthetase
- ec-number:
Reaction formula
- 1 CHLOROPHYLLIDE-A[c] + 1 PHYTYL-PYROPHOSPHATE[c] + 1 PROTON[c] <=> 1 CHLOROPHYLL-A[c] + 1 PPI[c]
Gene(s) associated with this reaction
- Gene: SJ07213
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7764, chlorophyll a biosynthesis III: PWY-7764
- 1 reactions found over 2 reactions in the full pathway
- PWY-5086, chlorophyll a biosynthesis I: PWY-5086
- 2 reactions found over 2 reactions in the full pathway
- PWY-5068, chlorophyll cycle: PWY-5068
- 4 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
External links
