Difference between revisions of "URKI-RXN"
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(Created page with "Category:reaction == Reaction RXN0-1132 == * direction: ** left-to-right * common-name: ** pyruvate dehydrogenase (nad+) ** lipoate acetyltransferase n6-(dihydrolipoyl)lys...") |
(Created page with "Category:reaction == Reaction RXN0-1132 == * direction: ** left-to-right * common-name: ** pyruvate dehydrogenase (nad+) ** lipoate acetyltransferase n6-(dihydrolipoyl)lys...") |
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| Line 36: | Line 36: | ||
</div> | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA: | + | * [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA I: |
** '''3''' reactions found over '''3''' reactions in the full pathway | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| Line 42: | Line 42: | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * METANETX-RXN : MNXR123103 | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
{{#set: common-name=pyruvate dehydrogenase (nad+)|lipoate acetyltransferase n6-(dihydrolipoyl)lysine:nad+ oxidoreductase}} | {{#set: common-name=pyruvate dehydrogenase (nad+)|lipoate acetyltransferase n6-(dihydrolipoyl)lysine:nad+ oxidoreductase}} | ||
| Line 47: | Line 48: | ||
{{#set: nb gene associated=6}} | {{#set: nb gene associated=6}} | ||
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
| − | {{#set: reconstruction category=annotation | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction tool=pathwaytools | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Revision as of 08:34, 15 March 2021
Contents
Reaction RXN0-1132
- direction:
- left-to-right
- common-name:
- pyruvate dehydrogenase (nad+)
- lipoate acetyltransferase n6-(dihydrolipoyl)lysine:nad+ oxidoreductase
- ec-number:
Reaction formula
- 1 NAD[c] + 1 Pyruvate-dehydrogenase-dihydrolipoate[c] => 1 NADH[c] + 1 PROTON[c] + 1 Pyruvate-dehydrogenase-lipoate[c]
Gene(s) associated with this reaction
- Gene: SJ01042
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ06474
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ10661
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ00971
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ13629
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ03718
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PYRUVDEHYD-PWY, pyruvate decarboxylation to acetyl CoA I:
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- METANETX-RXN : MNXR123103
