Difference between revisions of "URKI-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14136 RXN-14136] == * direction: ** left-to-right * common-name: ** glycerophosphoserine phosph...")
 
(Created page with "Category:reaction == Reaction URKI-RXN == * direction: ** left-to-right * common-name: ** gtp:uridine 5'-phosphotransferase ** uridine kinase * ec-number: ** [http://enzym...")
 
(9 intermediate revisions by 4 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14136 RXN-14136] ==
+
== Reaction URKI-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** glycerophosphoserine phosphodiesterase
+
** gtp:uridine 5'-phosphotransferase
 +
** uridine kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.4.46 ec-3.1.4.46]
+
** [http://enzyme.expasy.org/EC/2.7.1.48 ec-2.7.1.48]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD0-2030]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SER]][c]
+
* 1 [[GTP]][c] '''+''' 1 [[URIDINE]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UMP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16458]]
+
* Gene: [[SJ15690]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ06565]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[SJ00999]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16689]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ02034]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR105163
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29878 29878]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27650 27650]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00968 R00968]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P0A8F4 P0A8F4]
 +
** [http://www.uniprot.org/uniprot/P47622 P47622]
 +
** [http://www.uniprot.org/uniprot/Q9CF21 Q9CF21]
 +
** [http://www.uniprot.org/uniprot/P44533 P44533]
 +
** [http://www.uniprot.org/uniprot/P27515 P27515]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glycerophosphoserine phosphodiesterase}}
+
{{#set: common-name=gtp:uridine 5'-phosphotransferase|uridine kinase}}
−
{{#set: ec-number=ec-3.1.4.46}}
+
{{#set: ec-number=ec-2.7.1.48}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=4}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction URKI-RXN

  • direction:
    • left-to-right
  • common-name:
    • gtp:uridine 5'-phosphotransferase
    • uridine kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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