Difference between revisions of "UROGENIIISYN-RXN"

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(Created page with "Category:reaction == Reaction RXN66-11 == * direction: ** left-to-right * common-name: ** 24,25-dihydrolanosterol 14-hydroxylase ** 24,25-dihydrolanosterol,nadph:oxygen ox...")
(Created page with "Category:reaction == Reaction UROGENIIISYN-RXN == * direction: ** left-to-right * common-name: ** uroporphyrinogen iii synthase * ec-number: ** [http://enzyme.expasy.org/E...")
 
(5 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN66-11 ==
+
== Reaction UROGENIIISYN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 24,25-dihydrolanosterol 14-hydroxylase
+
** uroporphyrinogen iii synthase
−
** 24,25-dihydrolanosterol,nadph:oxygen oxidoreductase
+
* ec-number:
 +
** [http://enzyme.expasy.org/EC/4.2.1.75 ec-4.2.1.75]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-8606]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-8607]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[HYDROXYMETHYLBILANE]][c] '''=>''' 1 [[UROPORPHYRINOGEN-III]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05072]]
+
* Gene: [[SJ19532]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY66-3]], cholesterol biosynthesis II (via 24,25-dihydrolanosterol):
+
* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine):
−
** '''12''' reactions found over '''18''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate):
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR105139
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18965 18965]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03165 R03165]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P10746 P10746]
 +
** [http://www.uniprot.org/uniprot/P51163 P51163]
 +
** [http://www.uniprot.org/uniprot/P21248 P21248]
 +
** [http://www.uniprot.org/uniprot/Q58401 Q58401]
 +
** [http://www.uniprot.org/uniprot/P09126 P09126]
 +
** [http://www.uniprot.org/uniprot/Q59294 Q59294]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=24,25-dihydrolanosterol 14-hydroxylase|24,25-dihydrolanosterol,nadph:oxygen oxidoreductase}}
+
{{#set: common-name=uroporphyrinogen iii synthase}}
 +
{{#set: ec-number=ec-4.2.1.75}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction UROGENIIISYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • uroporphyrinogen iii synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5189, tetrapyrrole biosynthesis II (from glycine):
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5188, tetrapyrrole biosynthesis I (from glutamate):
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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