Difference between revisions of "UROGENIIISYN-RXN"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-3...") |
(Created page with "Category:reaction == Reaction UROGENIIISYN-RXN == * direction: ** left-to-right * common-name: ** uroporphyrinogen iii synthase * ec-number: ** [http://enzyme.expasy.org/E...") |
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| − | [[Category: | + | [[Category:reaction]] |
| − | == | + | == Reaction UROGENIIISYN-RXN == |
| − | * | + | * direction: |
| − | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
| − | ** | + | ** uroporphyrinogen iii synthase |
| − | == Reaction(s) | + | * ec-number: |
| − | * [[ | + | ** [http://enzyme.expasy.org/EC/4.2.1.75 ec-4.2.1.75] |
| − | * [[ | + | == Reaction formula == |
| − | * [[ | + | * 1 [[HYDROXYMETHYLBILANE]][c] '''=>''' 1 [[UROPORPHYRINOGEN-III]][c] '''+''' 1 [[WATER]][c] |
| − | * [[ | + | == Gene(s) associated with this reaction == |
| − | * [[ | + | * Gene: [[SJ19532]] |
| − | * [[ | + | ** Category: [[annotation]] |
| − | * [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | * [[ | + | ** Category: [[orthology]] |
| − | * [[ | + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | == | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | * [http:// | + | == Pathway(s) == |
| − | {{#set: | + | * [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): |
| − | {{#set: common-name= | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
| − | {{#set: nb | + | * [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): |
| − | {{#set: | + | ** '''6''' reactions found over '''6''' reactions in the full pathway |
| − | {{#set: | + | == Reconstruction information == |
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | == External links == | ||
| + | * METANETX-RXN : MNXR105139 | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18965 18965] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R03165 R03165] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/P10746 P10746] | ||
| + | ** [http://www.uniprot.org/uniprot/P51163 P51163] | ||
| + | ** [http://www.uniprot.org/uniprot/P21248 P21248] | ||
| + | ** [http://www.uniprot.org/uniprot/Q58401 Q58401] | ||
| + | ** [http://www.uniprot.org/uniprot/P09126 P09126] | ||
| + | ** [http://www.uniprot.org/uniprot/Q59294 Q59294] | ||
| + | {{#set: direction=left-to-right}} | ||
| + | {{#set: common-name=uroporphyrinogen iii synthase}} | ||
| + | {{#set: ec-number=ec-4.2.1.75}} | ||
| + | {{#set: nb gene associated=1}} | ||
| + | {{#set: nb pathway associated=2}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
| + | {{#set: reconstruction comment=n.a}} | ||
| + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} | ||
Latest revision as of 11:22, 18 March 2021
Contents
Reaction UROGENIIISYN-RXN
- direction:
- left-to-right
- common-name:
- uroporphyrinogen iii synthase
- ec-number:
Reaction formula
- 1 HYDROXYMETHYLBILANE[c] => 1 UROPORPHYRINOGEN-III[c] + 1 WATER[c]
Gene(s) associated with this reaction
- Gene: SJ19532
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5189, tetrapyrrole biosynthesis II (from glycine):
- 3 reactions found over 4 reactions in the full pathway
- PWY-5188, tetrapyrrole biosynthesis I (from glutamate):
- 6 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR105139
- RHEA:
- LIGAND-RXN:
- UNIPROT:
