Difference between revisions of "UROPORIIIMETHYLTRANSA-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN] == * direction: ** left-...")
(Created page with "Category:reaction == Reaction UROPORIIIMETHYLTRANSA-RXN == * direction: ** left-to-right * common-name: ** s-adenosyl-l-methionine:uroporphyrinogen-iii c-methyltransferase...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN] ==
+
== Reaction UROPORIIIMETHYLTRANSA-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* ec-number:
+
* common-name:
−
** [http://enzyme.expasy.org/EC/2.1.1.104 ec-2.1.1.104]
+
** s-adenosyl-l-methionine:uroporphyrinogen-iii c-methyltransferase
 +
* synonymous:
 +
** sira
 +
** cysg
 +
** s-adenosyl-l-methionine:uroporphyrin-iii c-methyltransferase (incorrect)
 +
** s-adenosyl-l-methionine-dependent uroporphyrinogen iii methylase
 +
** uroporphyrin-iii c-methyltransferase (incorrect)
 +
** adenosylmethionine-uroporphyrinogen iii methyltransferase
 +
** uroporphyrinogen-iii methyltransferase
 +
** uroporphyrinogen methyltransferase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CAFFEOYL-COA]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[FERULOYL-COA]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[UROPORPHYRINOGEN-III]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9038]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ01911]]
+
* Gene: [[SJ12313]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
+
* [[PWY-7376]], cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation):
−
** '''7''' reactions found over '''15''' reactions in the full pathway
+
** '''2''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-7398]], coumarins biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398]
+
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
−
** '''3''' reactions found over '''13''' reactions in the full pathway
+
** '''4''' reactions found over '''15''' reactions in the full pathway
−
* [[PWY-5710]], capsaicin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5710 PWY-5710]
+
* [[PWY-5196]], factor 430 biosynthesis:
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6792]], scopoletin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6792 PWY-6792]
+
* [[PWY-5194]], siroheme biosynthesis:
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
 
−
** '''9''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY-7498]], phenylpropanoids methylation (ice plant): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7498 PWY-7498]
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6039]], chlorogenic acid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6039 PWY-6039]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR110922
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16926 16926]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19090 19090]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01942 R01942]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07237 R07237]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P28034 P28034]
 
−
** [http://www.uniprot.org/uniprot/O65307 O65307]
 
−
** [http://www.uniprot.org/uniprot/Q42945 Q42945]
 
−
** [http://www.uniprot.org/uniprot/O24144 O24144]
 
−
** [http://www.uniprot.org/uniprot/O24149 O24149]
 
−
** [http://www.uniprot.org/uniprot/O24150 O24150]
 
−
** [http://www.uniprot.org/uniprot/O24151 O24151]
 
−
** [http://www.uniprot.org/uniprot/O04899 O04899]
 
−
** [http://www.uniprot.org/uniprot/O49499 O49499]
 
−
** [http://www.uniprot.org/uniprot/Q9SVI7 Q9SVI7]
 
−
** [http://www.uniprot.org/uniprot/Q40313 Q40313]
 
−
** [http://www.uniprot.org/uniprot/Q43095 Q43095]
 
−
** [http://www.uniprot.org/uniprot/O04854 O04854]
 
−
** [http://www.uniprot.org/uniprot/O65162 O65162]
 
−
** [http://www.uniprot.org/uniprot/O65362 O65362]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.1.1.104}}
+
{{#set: common-name=s-adenosyl-l-methionine:uroporphyrinogen-iii c-methyltransferase}}
 +
{{#set: synonymous=sira|cysg|uroporphyrinogen-iii methyltransferase|s-adenosyl-l-methionine-dependent uroporphyrinogen iii methylase|uroporphyrin-iii c-methyltransferase (incorrect)|s-adenosyl-l-methionine:uroporphyrin-iii c-methyltransferase (incorrect)|adenosylmethionine-uroporphyrinogen iii methyltransferase|uroporphyrinogen methyltransferase}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction UROPORIIIMETHYLTRANSA-RXN

  • direction:
    • left-to-right
  • common-name:
    • s-adenosyl-l-methionine:uroporphyrinogen-iii c-methyltransferase
  • synonymous:
    • sira
    • cysg
    • s-adenosyl-l-methionine:uroporphyrin-iii c-methyltransferase (incorrect)
    • s-adenosyl-l-methionine-dependent uroporphyrinogen iii methylase
    • uroporphyrin-iii c-methyltransferase (incorrect)
    • adenosylmethionine-uroporphyrinogen iii methyltransferase
    • uroporphyrinogen-iii methyltransferase
    • uroporphyrinogen methyltransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7376, cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation):
    • 2 reactions found over 13 reactions in the full pathway
  • PWY-7377, cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
    • 4 reactions found over 15 reactions in the full pathway
  • PWY-5196, factor 430 biosynthesis:
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5194, siroheme biosynthesis:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR110922
  • RHEA:
  • LIGAND-RXN:





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