Difference between revisions of "UROPORIIIMETHYLTRANSA-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN] == * direction: ** left-...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBODEHYDRAT-RXN CARBODEHYDRAT-RXN] == * direction: ** reversible * common-name: ** carbonate dehy...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBODEHYDRAT-RXN CARBODEHYDRAT-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** carbonate dehydratase
 +
** carbonic anhydrase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.104 ec-2.1.1.104]
+
** [http://enzyme.expasy.org/EC/4.2.1.1 ec-4.2.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CAFFEOYL-COA]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[FERULOYL-COA]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[H2CO3]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ01911]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ07324]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ17783]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18142]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13238]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ12311]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07587]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18135]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13240]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18140]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07765]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07762]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21158]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ22175]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18141]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
 
−
** '''7''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-7398]], coumarins biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398]
 
−
** '''3''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5710]], capsaicin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5710 PWY-5710]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6792]], scopoletin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6792 PWY-6792]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
 
−
** '''9''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY-7498]], phenylpropanoids methylation (ice plant): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7498 PWY-7498]
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6039]], chlorogenic acid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6039 PWY-6039]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00132 R00132]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16926 16926]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10751 10751]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01942 R01942]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P28034 P28034]
+
** [http://www.uniprot.org/uniprot/P07450 P07450]
−
** [http://www.uniprot.org/uniprot/O65307 O65307]
+
** [http://www.uniprot.org/uniprot/P07452 P07452]
−
** [http://www.uniprot.org/uniprot/Q42945 Q42945]
+
** [http://www.uniprot.org/uniprot/P13634 P13634]
−
** [http://www.uniprot.org/uniprot/O24144 O24144]
+
** [http://www.uniprot.org/uniprot/P08060 P08060]
−
** [http://www.uniprot.org/uniprot/O24149 O24149]
+
** [http://www.uniprot.org/uniprot/P16016 P16016]
−
** [http://www.uniprot.org/uniprot/O24150 O24150]
+
** [http://www.uniprot.org/uniprot/P20507 P20507]
−
** [http://www.uniprot.org/uniprot/O24151 O24151]
+
** [http://www.uniprot.org/uniprot/P16015 P16015]
−
** [http://www.uniprot.org/uniprot/O04899 O04899]
+
** [http://www.uniprot.org/uniprot/P40881 P40881]
−
** [http://www.uniprot.org/uniprot/O49499 O49499]
+
** [http://www.uniprot.org/uniprot/Q7LZP1 Q7LZP1]
−
** [http://www.uniprot.org/uniprot/Q9SVI7 Q9SVI7]
+
** [http://www.uniprot.org/uniprot/Q8X938 Q8X938]
−
** [http://www.uniprot.org/uniprot/Q40313 Q40313]
+
** [http://www.uniprot.org/uniprot/P00921 P00921]
−
** [http://www.uniprot.org/uniprot/Q43095 Q43095]
+
** [http://www.uniprot.org/uniprot/P00917 P00917]
−
** [http://www.uniprot.org/uniprot/O04854 O04854]
+
** [http://www.uniprot.org/uniprot/P00915 P00915]
−
** [http://www.uniprot.org/uniprot/O65162 O65162]
+
** [http://www.uniprot.org/uniprot/P00918 P00918]
−
** [http://www.uniprot.org/uniprot/O65362 O65362]
+
** [http://www.uniprot.org/uniprot/P07451 P07451]
 +
** [http://www.uniprot.org/uniprot/P22748 P22748]
 +
** [http://www.uniprot.org/uniprot/P35218 P35218]
 +
** [http://www.uniprot.org/uniprot/P43166 P43166]
 +
** [http://www.uniprot.org/uniprot/P00916 P00916]
 +
** [http://www.uniprot.org/uniprot/P00920 P00920]
 +
** [http://www.uniprot.org/uniprot/P00922 P00922]
 +
** [http://www.uniprot.org/uniprot/O24855 O24855]
 +
** [http://www.uniprot.org/uniprot/Q9PIQ7 Q9PIQ7]
 +
** [http://www.uniprot.org/uniprot/P14141 P14141]
 +
** [http://www.uniprot.org/uniprot/P43165 P43165]
 +
** [http://www.uniprot.org/uniprot/P07630 P07630]
 +
** [http://www.uniprot.org/uniprot/P27139 P27139]
 +
** [http://www.uniprot.org/uniprot/P35219 P35219]
 +
** [http://www.uniprot.org/uniprot/Q7M317 Q7M317]
 +
** [http://www.uniprot.org/uniprot/Q7M316 Q7M316]
 +
** [http://www.uniprot.org/uniprot/P0ABE9 P0ABE9]
 +
** [http://www.uniprot.org/uniprot/P18761 P18761]
 +
** [http://www.uniprot.org/uniprot/P17067 P17067]
 +
** [http://www.uniprot.org/uniprot/P23589 P23589]
 +
** [http://www.uniprot.org/uniprot/P24258 P24258]
 +
** [http://www.uniprot.org/uniprot/P27140 P27140]
 +
** [http://www.uniprot.org/uniprot/P27134 P27134]
 +
** [http://www.uniprot.org/uniprot/P46510 P46510]
 +
** [http://www.uniprot.org/uniprot/P46511 P46511]
 +
** [http://www.uniprot.org/uniprot/P46512 P46512]
 +
** [http://www.uniprot.org/uniprot/P46281 P46281]
 +
** [http://www.uniprot.org/uniprot/P18915 P18915]
 +
** [http://www.uniprot.org/uniprot/Q41728 Q41728]
 +
** [http://www.uniprot.org/uniprot/Q41729 Q41729]
 +
** [http://www.uniprot.org/uniprot/P27141 P27141]
 +
** [http://www.uniprot.org/uniprot/Q40628 Q40628]
 +
** [http://www.uniprot.org/uniprot/Q08056 Q08056]
 +
** [http://www.uniprot.org/uniprot/P40880 P40880]
 +
** [http://www.uniprot.org/uniprot/Q39588 Q39588]
 +
** [http://www.uniprot.org/uniprot/P93108 P93108]
 +
** [http://www.uniprot.org/uniprot/Q92051 Q92051]
 +
** [http://www.uniprot.org/uniprot/O04855 O04855]
 +
** [http://www.uniprot.org/uniprot/Q41088 Q41088]
 +
** [http://www.uniprot.org/uniprot/Q41089 Q41089]
 +
** [http://www.uniprot.org/uniprot/P46513 P46513]
 +
** [http://www.uniprot.org/uniprot/O04846 O04846]
 
</div>
 
</div>
−
{{#set: direction=left-to-right}}
+
{{#set: direction=reversible}}
−
{{#set: ec-number=ec-2.1.1.104}}
+
{{#set: common-name=carbonate dehydratase|carbonic anhydrase}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-4.2.1.1}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb gene associated=14}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Revision as of 09:30, 27 August 2019

Reaction CARBODEHYDRAT-RXN

  • direction:
    • reversible
  • common-name:
    • carbonate dehydratase
    • carbonic anhydrase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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