Difference between revisions of "UROPORPHYRINOGEN-III"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROSPHINGANINE-REDUCTASE-RXN 3-DEHYDROSPHINGANINE-REDUCTASE-RXN] == * direction: ** left-to-r...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9926 RXN-9926] == * direction: ** left-to-right * common-name: ** alditol oxidase ** xylitol ox...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROSPHINGANINE-REDUCTASE-RXN 3-DEHYDROSPHINGANINE-REDUCTASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9926 RXN-9926] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-ketodihydrosphingosine reductase
+
** alditol oxidase
 +
** xylitol oxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.102 ec-1.1.1.102]
+
** [http://enzyme.expasy.org/EC/1.1.3.41 ec-1.1.3.41]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DEHYDROSPHINGANINE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-13612]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[Sugar-alcohols]][c] '''=>''' 1 [[Aldoses]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12778]]
+
* Gene: [[SJ14476]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ14480]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=SPHINGOLIPID-SYN-PWY SPHINGOLIPID-SYN-PWY]
 
−
** '''4''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-5129]], sphingolipid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5129 PWY-5129]
 
−
** '''4''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY3DJ-12]], ceramide de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-12 PWY3DJ-12]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22642 22642]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25909 25909]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02978 R02978]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-ketodihydrosphingosine reductase}}
+
{{#set: common-name=alditol oxidase|xylitol oxidase}}
−
{{#set: ec-number=ec-1.1.1.102}}
+
{{#set: ec-number=ec-1.1.3.41}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:24, 26 August 2019

Reaction RXN-9926

  • direction:
    • left-to-right
  • common-name:
    • alditol oxidase
    • xylitol oxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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