Difference between revisions of "URPHOS-RXN"

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(Created page with "Category:reaction == Reaction RXN-10057 == * direction: ** left-to-right * common-name: ** 2,5-diamino-6-(ribosylamino)-4-(3h)-pyrimidinone 5'-phosphate reductase * ec-num...")
(Created page with "Category:reaction == Reaction 2.1.1.114-RXN == * direction: ** left-to-right * common-name: ** hexaprenyldihydroxybenzoate methyltransferase ** s-adenosyl-l-methionine:3-h...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-10057 ==
+
== Reaction 2.1.1.114-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 2,5-diamino-6-(ribosylamino)-4-(3h)-pyrimidinone 5'-phosphate reductase
+
** hexaprenyldihydroxybenzoate methyltransferase
 +
** s-adenosyl-l-methionine:3-hexaprenyl-4,5-dihydroxybenzoate o-methyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.302 ec-1.1.1.302]
+
** [http://enzyme.expasy.org/EC/2.1.1.114 ec-2.1.1.114]
 +
* synonymous:
 +
** dhhb methyltransferase
 +
** dhhb-mt
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DIAMINO-OH-PHOSPHORIBOSYLAMINO-PYR]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-10809]][c] '''+''' 1 [[NAD]][c]
+
* 1 [[3-HEXAPRENYL-45-DIHYDROXYBENZOATE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[3-HEXAPRENYL-4-HYDROXY-5-METHOXYBENZOATE]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02182]]
+
* Gene: [[SJ13007]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6168]], flavin biosynthesis III (fungi):
+
* [[PWY-7233]]:
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''n.a''' reactions in the full pathway
−
* [[PWY-6167]], flavin biosynthesis II (archaea):
+
* [[PWY-7235]], superpathway of ubiquinol-6 biosynthesis (late decarboxylation):
−
** '''5''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''n.a''' reactions in the full pathway
 +
* [[PWY3O-19]], ubiquinol-6 biosynthesis (late decarboxylation):
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27277 27277]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R09376 R09376]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=2,5-diamino-6-(ribosylamino)-4-(3h)-pyrimidinone 5'-phosphate reductase}}
+
{{#set: common-name=s-adenosyl-l-methionine:3-hexaprenyl-4,5-dihydroxybenzoate o-methyltransferase|hexaprenyldihydroxybenzoate methyltransferase}}
−
{{#set: ec-number=ec-1.1.1.302}}
+
{{#set: ec-number=ec-2.1.1.114}}
 +
{{#set: synonymous=dhhb methyltransferase|dhhb-mt}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:35, 15 March 2021

Reaction 2.1.1.114-RXN

  • direction:
    • left-to-right
  • common-name:
    • hexaprenyldihydroxybenzoate methyltransferase
    • s-adenosyl-l-methionine:3-hexaprenyl-4,5-dihydroxybenzoate o-methyltransferase
  • ec-number:
  • synonymous:
    • dhhb methyltransferase
    • dhhb-mt

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7233:
    • 3 reactions found over n.a reactions in the full pathway
  • PWY-7235, superpathway of ubiquinol-6 biosynthesis (late decarboxylation):
    • 3 reactions found over n.a reactions in the full pathway
  • PWY3O-19, ubiquinol-6 biosynthesis (late decarboxylation):
    • 4 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=URPHOS-RXN&oldid=128160"