Difference between revisions of "URPHOS-RXN"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROSTAGLANDIN-D-SYNTHASE-RXN PROSTAGLANDIN-D-SYNTHASE-RXN] == * direction: ** left-to-right * commo...") |
(Created page with "Category:reaction == Reaction URPHOS-RXN == * direction: ** reversible * common-name: ** uridine phosphorylase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.2 ec-2.4....") |
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[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction URPHOS-RXN == |
* direction: | * direction: | ||
| − | ** | + | ** reversible |
* common-name: | * common-name: | ||
| − | ** | + | ** uridine phosphorylase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.4.2.2 ec-2.4.2.2] |
| + | ** [http://enzyme.expasy.org/EC/2.4.2.3 ec-2.4.2.3] | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[Pi]][c] '''+''' 1 [[URIDINE]][c] '''<=>''' 1 [[RIBOSE-1P]][c] '''+''' 1 [[URACIL]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | + | * Gene: [[SJ03195]] | |
| − | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
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== Pathway(s) == | == Pathway(s) == | ||
| − | * [[ | + | * [[PWY-5532]], nucleoside and nucleotide degradation (archaea): |
| − | ** '''2''' reactions found over ''' | + | ** '''4''' reactions found over '''10''' reactions in the full pathway |
| + | * [[PWY0-1295]], pyrimidine ribonucleosides degradation: | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * METANETX-RXN : MNXR103377 | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24391 24391] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01876 R01876] |
* UNIPROT: | * UNIPROT: | ||
| − | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P52624 P52624] |
| − | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P43770 P43770] |
| − | {{#set: direction= | + | ** [http://www.uniprot.org/uniprot/Q16831 Q16831] |
| − | {{#set: common-name= | + | ** [http://www.uniprot.org/uniprot/P12758 P12758] |
| − | {{#set: ec-number=ec- | + | ** [http://www.uniprot.org/uniprot/P19662 P19662] |
| − | {{#set: nb gene associated= | + | ** [http://www.uniprot.org/uniprot/O08444 O08444] |
| − | {{#set: nb pathway associated= | + | {{#set: direction=reversible}} |
| + | {{#set: common-name=uridine phosphorylase}} | ||
| + | {{#set: ec-number=ec-2.4.2.3|ec-2.4.2.2}} | ||
| + | {{#set: nb gene associated=1}} | ||
| + | {{#set: nb pathway associated=2}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome}} | {{#set: reconstruction source=saccharina_japonica_genome}} | ||
Latest revision as of 11:20, 18 March 2021
Contents
Reaction URPHOS-RXN
- direction:
- reversible
- common-name:
- uridine phosphorylase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ03195
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5532, nucleoside and nucleotide degradation (archaea):
- 4 reactions found over 10 reactions in the full pathway
- PWY0-1295, pyrimidine ribonucleosides degradation:
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR103377
- RHEA:
- LIGAND-RXN:
- UNIPROT:
