Difference between revisions of "URPHOS-RXN"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7931 RXN-7931] == * direction: ** reversible * common-name: ** δ3,δ2-enoyl-coa isom...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.23-RXN 2.7.8.23-RXN] == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.23-RXN 2.7.8.23-RXN] == |
* direction: | * direction: | ||
** reversible | ** reversible | ||
| − | |||
| − | |||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.7.8.23 ec-2.7.8.23] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[1-CARBOXYVINYL-CARBOXYPHOSPHONATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[3-HYDROHYDROXYPHOSPHORYLPYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ05283]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[SJ05932]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[SJ05933]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[SJ02830]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14045 14045] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R05165 R05165] |
{{#set: direction=reversible}} | {{#set: direction=reversible}} | ||
| − | + | {{#set: ec-number=ec-2.7.8.23}} | |
| − | {{#set: ec-number=ec- | + | {{#set: nb gene associated=4}} |
| − | {{#set: nb gene associated= | + | {{#set: nb pathway associated=0}} |
| − | {{#set: nb pathway associated= | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
| − | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 14:28, 26 August 2019
Contents
Reaction 2.7.8.23-RXN
- direction:
- reversible
- ec-number:
Reaction formula
- 1 1-CARBOXYVINYL-CARBOXYPHOSPHONATE[c] + 1 PROTON[c] <=> 1 3-HYDROHYDROXYPHOSPHORYLPYRUVATE[c] + 1 CARBON-DIOXIDE[c]
Gene(s) associated with this reaction
- Gene: SJ05283
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ05932
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ05933
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ02830
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
