Difference between revisions of "Ubiquinols"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LCYSDESULF-RXN LCYSDESULF-RXN] == * direction: ** left-to-right * common-name: ** cystathionine gam...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFATE-ADENYLYLTRANS-RXN SULFATE-ADENYLYLTRANS-RXN] == * direction: ** reversible * common-name: *...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LCYSDESULF-RXN LCYSDESULF-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFATE-ADENYLYLTRANS-RXN SULFATE-ADENYLYLTRANS-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** cystathionine gamma-lyase
+
** sulfate adenylyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.4.1.1 ec-4.4.1.1]
+
** [http://enzyme.expasy.org/EC/2.7.7.4 ec-2.7.7.4]
−
** [http://enzyme.expasy.org/EC/4.4.1.28 ec-4.4.1.28]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CYS]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[HS]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SULFATE]][c] '''<=>''' 1 [[APS]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05358]]
+
* Gene: [[SJ09890]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ20026]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ04851]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ05357]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY66-426]], hydrogen sulfide biosynthesis II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-426 PWY66-426]
+
* [[PWY-5278]], sulfite oxidation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5278 PWY-5278]
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[DISSULFRED-PWY]], dissimilatory sulfate reduction I (to hydrogen sufide)): [http://metacyc.org/META/NEW-IMAGE?object=DISSULFRED-PWY DISSULFRED-PWY]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[P224-PWY]], dissimilatory sulfate reduction II (to thiosulfate): [http://metacyc.org/META/NEW-IMAGE?object=P224-PWY P224-PWY]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6683]], assimilatory sulfate reduction III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6683 PWY-6683]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[SULFMETII-PWY]], assimilatory sulfate reduction II: [http://metacyc.org/META/NEW-IMAGE?object=SULFMETII-PWY SULFMETII-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5340]], sulfate activation for sulfonation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5340 PWY-5340]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24932 24932]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18136 18136]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00782 R00782]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00529 R00529]
−
{{#set: direction=left-to-right}}
+
* UNIPROT:
−
{{#set: common-name=cystathionine gamma-lyase}}
+
** [http://www.uniprot.org/uniprot/Q12650 Q12650]
−
{{#set: ec-number=ec-4.4.1.28|ec-4.4.1.1}}
+
** [http://www.uniprot.org/uniprot/O33581 O33581]
−
{{#set: nb gene associated=3}}
+
** [http://www.uniprot.org/uniprot/O34764 O34764]
−
{{#set: nb pathway associated=1}}
+
** [http://www.uniprot.org/uniprot/Q10600 Q10600]
 +
** [http://www.uniprot.org/uniprot/O67174 O67174]
 +
** [http://www.uniprot.org/uniprot/P21156 P21156]
 +
** [http://www.uniprot.org/uniprot/O23324 O23324]
 +
** [http://www.uniprot.org/uniprot/Q9JUD7 Q9JUD7]
 +
** [http://www.uniprot.org/uniprot/Q9PM66 Q9PM66]
 +
** [http://www.uniprot.org/uniprot/Q9JUD6 Q9JUD6]
 +
** [http://www.uniprot.org/uniprot/P28604 P28604]
 +
** [http://www.uniprot.org/uniprot/Q27128 Q27128]
 +
** [http://www.uniprot.org/uniprot/P23845 P23845]
 +
** [http://www.uniprot.org/uniprot/O43252 O43252]
 +
** [http://www.uniprot.org/uniprot/Q43170 Q43170]
 +
** [http://www.uniprot.org/uniprot/Q43183 Q43183]
 +
** [http://www.uniprot.org/uniprot/Q43870 Q43870]
 +
** [http://www.uniprot.org/uniprot/Q12555 Q12555]
 +
** [http://www.uniprot.org/uniprot/P08536 P08536]
 +
** [http://www.uniprot.org/uniprot/P74241 P74241]
 +
** [http://www.uniprot.org/uniprot/O48888 O48888]
 +
** [http://www.uniprot.org/uniprot/Q39595 Q39595]
 +
** [http://www.uniprot.org/uniprot/Q96349 Q96349]
 +
** [http://www.uniprot.org/uniprot/Q96541 Q96541]
 +
** [http://www.uniprot.org/uniprot/Q9S7D8 Q9S7D8]
 +
** [http://www.uniprot.org/uniprot/P13441 P13441]
 +
** [http://www.uniprot.org/uniprot/P13442 P13442]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=sulfate adenylyltransferase}}
 +
{{#set: ec-number=ec-2.7.7.4}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=6}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 14:25, 26 August 2019

Reaction SULFATE-ADENYLYLTRANS-RXN

  • direction:
    • reversible
  • common-name:
    • sulfate adenylyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5278, sulfite oxidation III: PWY-5278
    • 2 reactions found over 2 reactions in the full pathway
  • DISSULFRED-PWY, dissimilatory sulfate reduction I (to hydrogen sufide)): DISSULFRED-PWY
    • 2 reactions found over 4 reactions in the full pathway
  • P224-PWY, dissimilatory sulfate reduction II (to thiosulfate): P224-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-6683, assimilatory sulfate reduction III: PWY-6683
    • 3 reactions found over 3 reactions in the full pathway
  • SULFMETII-PWY, assimilatory sulfate reduction II: SULFMETII-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5340, sulfate activation for sulfonation: PWY-5340
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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