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| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-302 RXN0-302] == | + | == Metabolite Uracil47-in-tRNAs == |
| − | * direction:
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| − | ** left-to-right
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| | * common-name: | | * common-name: |
| − | ** 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | + | ** a uracil47 in trna |
| − | * ec-number:
| + | == Reaction(s) known to consume the compound == |
| − | ** [http://enzyme.expasy.org/EC/4.6.1.12 ec-4.6.1.12]
| + | * [[RXN-12457]] |
| − | == Reaction formula == | + | == Reaction(s) known to produce the compound == |
| − | * 1 [[2-PHOSPHO-4-CYTIDINE-5-DIPHOSPHO-2-C-MET]][c] '''=>''' 1 [[2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE]][c] '''+''' 1 [[CMP]][c]
| + | == Reaction(s) of unknown directionality == |
| − | == Gene(s) associated with this reaction ==
| + | {{#set: common-name=a uracil47 in trna}} |
| − | * Gene: [[SJ21110]] | |
| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | == Pathway(s) == | |
| − | * [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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| − | ** '''9''' reactions found over '''9''' reactions in the full pathway
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| − | * [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
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| − | ** '''9''' reactions found over '''9''' reactions in the full pathway
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| − | == Reconstruction information ==
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| − | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | == External links == | |
| − | * RHEA:
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| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23865 23865]
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| − | * LIGAND-RXN:
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| − | ** [http://www.genome.jp/dbget-bin/www_bget?R05637 R05637]
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| − | {{#set: direction=left-to-right}}
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| − | {{#set: common-name=2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase}} | |
| − | {{#set: ec-number=ec-4.6.1.12}}
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| − | {{#set: nb gene associated=1}}
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| − | {{#set: nb pathway associated=2}}
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| − | {{#set: reconstruction category=orthology|annotation}}
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| − | {{#set: reconstruction tool=pathwaytools|pantograph}}
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| − | {{#set: reconstruction comment=n.a}}
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| − | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
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