Difference between revisions of "XANDH"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7126 PWY-7126] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-4890 tax-48...")
(Created page with "Category:reaction == Reaction RXN0-5408 == * direction: ** left-to-right * common-name: ** inositol monophosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.25 e...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7126 PWY-7126] ==
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== Reaction RXN0-5408 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-4890 tax-4890]
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-1224 tax-1224]
 
 
* common-name:
 
* common-name:
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** ethylene biosynthesis iv (engineered)
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** inositol monophosphatase
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== Reaction(s) found ==
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* ec-number:
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* [[GLUTAMATE-DEHYDROGENASE-RXN]]
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** [http://enzyme.expasy.org/EC/3.1.3.25 ec-3.1.3.25]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12538 RXN-12538]
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* 1 [[D-MYO-INOSITOL-1-MONOPHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MYO-INOSITOL]][c] '''+''' 1 [[Pi]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13396 RXN-13396]
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== Gene(s) associated with this reaction  ==
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{{#set: taxonomic-range=tax-4890|tax-1224}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: common-name=ethylene biosynthesis iv (engineered)}}
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* Gene: [[SJ01133]]
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{{#set: nb reaction found=1}}
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** Category: [[annotation]]
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{{#set: completion rate=0.33}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb total reaction=3}}
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ10706]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ18979]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ04955]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ05836]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ11258]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ15444]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ20976]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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</div>
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== Pathway(s) ==
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* [[PWY-4702]], phytate degradation I:
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** '''3''' reactions found over '''14''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27671 27671]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01185 R01185]
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{{#set: direction=left-to-right}}
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{{#set: common-name=inositol monophosphatase}}
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{{#set: ec-number=ec-3.1.3.25}}
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{{#set: nb gene associated=8}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:45, 18 December 2020

Reaction RXN0-5408

  • direction:
    • left-to-right
  • common-name:
    • inositol monophosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4702, phytate degradation I:
    • 3 reactions found over 14 reactions in the full pathway

Reconstruction information

External links





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