Difference between revisions of "XPPRT"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction MANNPDEHYDROG-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.17 ec-1.1.1.17] == Reaction formula == * 1...")
(Created page with "Category:reaction == Reaction RXN-13444 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134] == Reaction formula == * 1 ...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction MANNPDEHYDROG-RXN ==
+
== Reaction RXN-13444 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.17 ec-1.1.1.17]
+
** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MANNITOL-1P]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-14424]][c] '''=>''' 1 [[CPD-14425]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15139]]
+
* Gene: [[SJ00783]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ20113]]
+
* Gene: [[SJ06882]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[MANNIDEG-PWY]], mannitol degradation I:
+
* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes):
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6531]], mannitol cycle:
+
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals):
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''8''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals):
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19664 19664]
+
{{#set: ec-number=ec-4.2.1.134}}
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00758 R00758]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P09424 P09424]
 
−
** [http://www.uniprot.org/uniprot/P27543 P27543]
 
−
** [http://www.uniprot.org/uniprot/Q02418 Q02418]
 
−
** [http://www.uniprot.org/uniprot/P42957 P42957]
 
−
** [http://www.uniprot.org/uniprot/P78008 P78008]
 
−
{{#set: direction=reversible}}
 
−
{{#set: ec-number=ec-1.1.1.17}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:01, 5 January 2021

Reaction RXN-13444

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7053, docosahexaenoate biosynthesis I (lower eukaryotes):
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals):
    • 8 reactions found over 14 reactions in the full pathway
  • PWY-7727, docosahexaenoate biosynthesis IV (4-desaturase, mammals):
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=XPPRT&oldid=62222"